Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 8e-12 >seq8 Length=958091 Score = 86.0 bits (94), Expect = 8e-12 Identities = 142/203 (70%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 32703 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 32762 |||||||| |||||||| |||||||| || || ||||| || ||||| || |||| || Sbjct 467231 TCGTTGGAGAACGTGAGGCCGGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCGGCG 467290 Query 32763 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 32822 || || || || ||||| | || || || || || || || | || | ||| || || Sbjct 467291 AACGAGCCGGAGAAGAAGACGCCCTCGACGGCGGCGAACGCGACGAGCCGCTCCGCAAAA 467350 Query 32823 CCGG--CGCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 32879 | | |||| ||| |||||| | ||||| ||||||||||| || | || || Sbjct 467351 GCAGAACGCTCGTCCGCGATCCACCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGT 467410 Query 32880 ATTGTCTCTATAGCATTAAAGAG 32902 || || || || || | ||||| Sbjct 467411 ATGGTGTCGATGGCGTCGAAGAG 467433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629576357600