Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq8 120 4e-22 >seq8 Length=958091 Score = 120 bits (132), Expect = 4e-22 Identities = 334/505 (66%), Gaps = 13/505 (3%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||| || ||||||||||| || || ||||| || || ||||| | || |||||| Sbjct 469652 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAACGTGAGGCCAGGCATCAAGCCACGCTTC 469593 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | || || || ||||||||||| ||||||||| ||||| Sbjct 469592 TTGAGCCAGAAGATGGAGGCGAAGGATCCAGAGAAGAAGATACCCTCCACAGCGGCGAAG 469533 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGC-GACT--TTGT-GTCAAACCACTTCATCGCCCA 126240 || | ||||||||| || || ||| |||| |||| | || ||| | ||||| Sbjct 469532 GCGATGAGACGCTCGGC----GAACGCAGACTCCTTGTCGGAAATCCAGCGAAGAGCCCA 469477 Query 126241 CTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTC 126300 | ||||| |||| ||| || || | ||| | ||| || || ||||| | || | Sbjct 469476 GTCGGCCTTCTTCTTGATGCAAGGAATGGTGTCGATGGCGTCGAAGAGGTGCTCGCGCTG 469417 Query 126301 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TT 126359 | || || |||||||| |||| ||||| || || || || ||||| | | Sbjct 469416 AGCGGGGTCCTTGATGTAGGTATCAATGAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTC 469357 Query 126360 CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAA 126419 ||| || ||| | ||||||| |||||||||| | ||| ||||| | || || Sbjct 469356 CATCAT-AATCTGGAAGCCGTAGAAGCAGCGCGCTTCCGCTGCCTGAACCTCGTTGGAAA 469298 Query 126420 AATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATAT 126479 | | | || ||||| || || || || ||| | || || || || |||| | Sbjct 469297 ACCTCTCGACGAGGTTCTCGTTGACGATGCCGTCCGACGCGGCGAAGAATGCGAGGACGT 469238 Query 126480 ACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCGTCAAGATCCTTCG 126536 | ||||| | | |||| ||| | || | | |||||||||| |||||||| | Sbjct 469237 GCGAAATGAAGTATCGCTCATCGTCGGTGAGCTTGTTGTTCCAGTCGTGCAGATCCTTGG 469178 Query 126537 AGAGATCTACCTCCTCCGCAGTCCA 126561 | | || | |||||| || ||||| Sbjct 469177 ACAAGTCCATCTCCTCTGCCGTCCA 469153 Score = 102 bits (112), Expect = 1e-16 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| ||||||||||| || || ||||| || || |||||||| || |||||| Sbjct 467210 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGCCCGCGCTTC 467269 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || || || || || |||||||||| ||||| || |||||| Sbjct 467270 TTGAGCCAGAAGATGGCGGCGAACGAGCCGGAGAAGAAGACGCCCTCGACGGCGGCGAAC 467329 Query 126185 GCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCCCACTG 126243 || | ||| ||||| || |||| || || || | | |||| | ||||| | Sbjct 467330 GCGACGAGCCGCTCCGCAAAAGCAGAACG-CTCGTCCGCGATCCACCGGAGGGCCCAGTC 467388 Query 126244 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 ||||| |||| ||| || || | ||| | ||| || || ||||| Sbjct 467389 GGCCTTCTTCTTGATGCAGGGTATGGTGTCGATGGCGTCGAAGAG 467433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351315122480