Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8 192 6e-44 seq4 109 5e-19 seq2 96.9 3e-15 seq29 87.8 2e-12 >seq8 Length=958091 Score = 192 bits (212), Expect = 6e-44 Identities = 503/762 (66%), Gaps = 19/762 (2%) Strand=Plus/Minus Query 52084 TAAACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATA 52143 ||||||| ||||||| | || ||| ||||| | || || ||||||||| | ||| Sbjct 467654 TAAACGACAACGAGCGGCACTTCATCTCCTACGTGCTCGCCTTTTTCGCCGCCTCGGATG 467595 Query 52144 GCATCGTGAACATTAACCTCATCGAGTACATG--CAGCGGAACGTTCCGGAACTCGAGGC 52201 ||||||||||| |||||| | || | | || || | || | || ||||| Sbjct 467594 GCATCGTGAACGAAAACCTCGTGGAACGCTTCTCCAACG--AGGTGCAGGCCGCGGAGGC 467537 Query 52202 GCAATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCT 52261 || | ||||||| || ||| | | |||||| ||||||| | |||| |||| || Sbjct 467536 GCGCTGCTTTTATGGCTTCCAAATCATGATCGAGAACGTGCACGCCGAGACGTACTCGCT 467477 Query 52262 GCTCATTGAGCAGCTG-ATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGTTCG 52320 ||||| || || || || || |||||||| | || | | || ||| Sbjct 467476 CCTCATCGA-CACCTACATCCGCGACCCCGCCGAGCGCGCCTTCCTCTTCGACGCCATCG 467418 Query 52321 AGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACA 52380 | | | || ||| | || ||||| | ||||| | |||||||| | ||| Sbjct 467417 ACACCATACCCTGCATCAAGAAGAAGGCCGACTGGGCCCTCCGGTGGATCGCGGACGAGC 467358 Query 52381 CCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCG 52440 | | | || ||||| | || || |||||| ||||||||||| || || |||| Sbjct 467357 GTTCTGCTTTTGCGGAGCGGCTCGTCGCGTTCGCCGCCGTCGAGGGCGTCTTCTTCTCCG 467298 Query 52441 GCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCA 52500 || || ||||||||||| | | || | | || | ||||||||||| |||||| Sbjct 467297 GCTCGTTCGCCGCCATCTTCTGGCTCAAGAAGCGCGGGCTCATGCCCGGCCTCACGTTCT 467238 Query 52501 GCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACA 52560 ||||||| | || || |||||||| || |||| || ||||| ||||||||| || | Sbjct 467237 CCAACGAGCTCATCTCCCGCGACGAGGGCATGCATACCGACTTCGCGTGCCTCCTCTTCC 467178 Query 52561 AGA-----CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGA 52615 | ||| | | ||| | | | | || | || |||| || || Sbjct 467177 ACCACCTCCGCCGGCGGCCGCACCC-------CCGCCGCG-TGCTCCGCATCGTCGCCGA 467126 Query 52616 GGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCAT 52675 ||| || | ||||| |||||||| | |||| ||||| |||||| ||| | ||||| Sbjct 467125 GGCCGTCGAGATCGAGAAGGAGTTCCTCACGGAGGCGCTCCCGGTCTCGCTCATCGGCAT 467066 Query 52676 GAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 52735 |||||||| | |||||| ||||||||||||| || ||||| || ||| | || ||| Sbjct 467065 GAACGCGCGGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTCGCGCT 467006 Query 52736 CGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCT 52795 |||| | ||| ||| | ||| || |||||||| || ||| ||| || ||||| Sbjct 467005 CGGGAACGAGAAGCACTACCGCGCGGCGAACCCGTTTGACTTCATGGACATGATCTCGCT 466946 Query 52796 TGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||| ||||| ||||||||||| || |||||| Sbjct 466945 CACCGGCAAGACGAACTTCTTCGAGAAGCGCGTGTCCGAGTA 466904 Score = 105 bits (116), Expect = 7e-18 Identities = 123/161 (76%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 ||||||||| || || ||||||| | ||||||||||| || |||||||| || | || Sbjct 469844 GGCATGAACTCGAAGCTCATGTGCCAATACATCGAGTTCGTTGCGGATCGCCTCCTCGTC 469903 Query 52731 CAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACA 52788 ||||| | || | ||| ||| ||||| || | || || || || || ||| ||| | Sbjct 469904 GCTCTCGG-CGGCGAGAAGCACTACAACG-TCACGAACCCCTTCGATTTCATGGACATGA 469961 Query 52789 TTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 | ||||| |||||||||||||||| ||||||||||| ||| Sbjct 469962 TCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTC 470002 >seq4 Length=1487122 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | |||| ||| | ||| | | | |||||||| || ||||||||||| | Sbjct 24062 CCGCCACGGAGGCGCAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAC 24121 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || || |||| |||| |||||||| ||||| || || Sbjct 24122 AACGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGCGGG 24181 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | |||||| | |||||| || Sbjct 24182 ATGCCCTCCTTGTCCTGGATCTTCGCCTTAACATTG-TCGATGGTGTCCGACGACTCAAC 24240 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| || | ||| || || || || || || || || ||||||||| Sbjct 24241 CTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 24289 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | |||||||| |||||||||||||| | Sbjct 23553 CCACCGCGCAGACGAAGGACCAAGTGAAGCGTGGACTCCTTCTGAATGTTGTAGTCCGAC 23612 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||| | || || |||| |||| | ||||| ||||| ||||| Sbjct 23613 AGAGTACGTCCGTCCTCCAACTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGG 23672 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || ||||| ||| || || | | || | ||||||| ||||| ||| Sbjct 23673 ATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACC 23732 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || || || || || || || ||||| Sbjct 23733 TCCAAGGTGATGGTCTTGCCCGTGAGCGTCTTGACGAAGATTTGCAT 23779 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || ||||| || || || |||| Sbjct 23867 GACTCCTTCTGGATGTTGTAGTCCGACAACGTGCGACCATCCTCCAGCTGCTTGCCGGCG 23926 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| ||||| || || || || || || || ||| | || | || | Sbjct 23927 AAGATAAGACGCTGCTGGTCTGGCGGGATTCCCTCCTTATC-CTGAATCTTGGCCTTGAC 23985 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | ||||| ||||| | ||| | ||| || || |||| || | Sbjct 23986 GTTG-TCGATGGTGTCAGAAGACTCGACCTCCAGCGTGATCGTCTTGCCGGTCAACGTCT 24044 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 24045 TCACGAAGATCTGCAT 24060 >seq2 Length=1603695 Score = 96.9 bits (106), Expect = 3e-15 Identities = 402/621 (65%), Gaps = 14/621 (2%) Strand=Plus/Minus Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 |||| || ||| | || || ||||| | || ||| |||| || || ||||| || Sbjct 1472990 AAGGCTCGAAGCACTCATTGTTGCCCAAGATCTGACTGGTGGAGGCAGTAGGCATCGGCG 1472931 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAA 153203 | || | || || |||| | |||||| || | | ||| ||||||| || ||| | Sbjct 1472930 CGACGAGCAGCGAGTTCCTGAGACCGTGCTGCGCCACCTTCG-CCTTCAA-GCTGGCCCA 1472873 Query 153204 -TCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGC 153262 ||||| || ||| || ||| || ||| | ||||||||| | | || | ||| Sbjct 1472872 GTCCCAGAGGTCCGTAGGGGTCACGCCCCAGAGGTCGTACTGAAGCTTGCCCTCAGAGGC 1472813 Query 153263 GGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTC 153322 ||||||||| |||| |||| | |||| | || |||| || ||||| ||||| Sbjct 1472812 GGGACTGCCCTTGTACGTCTCGTAGGTACCGTATTGCTGCGCCATCTCACAGCTGGCCTC 1472753 Query 153323 GAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCT 153382 || ||| | | ||| ||||| || ||| || | ||||| | || || Sbjct 1472752 GACCGCCGCGTGGTAGATGGTCTCAAAGATCTGCTGGTTGAGCTTGCGTGCCTCGGGAGA 1472693 Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442 ||| | |||| || ||| || || ||||| |||||||| || | |||||| ||||| Sbjct 1472692 GTCGAAGGGCAGACGAAGCGCCATGAACGCGTCCGCCAGACCTTGCACACCGACACCGAT 1472633 Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGATTGCGATCGA 153501 || || || | |||| |||| | || ||| | || || ||||| ||| ||||| Sbjct 1472632 AGGGCGGTGACGCATGTTGGAGCGCTTAGC-CTCAGGGATTGGGTAGTGGTTGACATCGA 1472574 Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 | || |||||||||| | ||||| || || | | | || |||| ||||| | Sbjct 1472573 TGATGCGGTTGAGGTTGAAGGCGACCACCTTCGTAACGTCGTGCAGCTTCTGGAAATTGT 1472514 Query 153562 AGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGG 153621 | | | | |||| | ||| | || | || ||||| |||| || || || | Sbjct 1472513 ACTTGCCTCCCTCGA--TGAACG-AGGGA---AGAGCGATAGAGGCCAAGTTGCAAACAG 1472460 Query 153622 CCGTCTC-TTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATG 153680 | ||||| | ||||| | ||||| |||||| |||| ||| || || | | || || Sbjct 1472459 CGGTCTCGTCCGGCG-AGGAGTACTCCACGATTTCGGTGCATAGATTCGAGGACTTGATA 1472401 Query 153681 ACGCCCAAATTTTGCTGATTG 153701 ||| | ||| ||||| ||| Sbjct 1472400 GTGCCGAGATTCTGCTGGTTG 1472380 >seq29 Length=419596 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||| | ||||| ||||||||| || || |||| | Sbjct 161171 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 161112 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||| ||||| || || ||||| || ||||| ||| || || | | Sbjct 161111 GATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATT 161052 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||| | ||||| ||||| | ||| | ||| || || || || || || || Sbjct 161051 ATCGATCGTGTCCGAAGACTCGACCTCCAACGTGATCGTCTTGCCGGTGAGCGTCTTGAC 160992 Query 138603 AAAAATCTGCATGGCT 138618 || ||||||||| || Sbjct 160991 GAAGATCTGCATGCCT 160976 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| | || | | | |||||||| || ||||||||||| Sbjct 160979 GCCTCCGCGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 160920 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || |||||||| || || || | | || | ||||| ||||| || || Sbjct 160919 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGCTGGTCGGGCGG 160860 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| | || | || | ||| || | |||||||| |||||| Sbjct 160859 AATGCCCTCCTTGTC-TTGAATCTTCGCCTTGACGTTG-TCGATGGTGTCGGACGACTCG 160802 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | || || || |||| || || ||||| |||||||| Sbjct 160801 ACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 160752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260501796320