Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8 181 2e-40 seq2 84.2 3e-11 >seq8 Length=958091 Score = 181 bits (200), Expect = 2e-40 Identities = 358/523 (68%), Gaps = 9/523 (2%) Strand=Plus/Plus Query 159641 GACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCG 159700 ||||| ||||||||| ||||| |||||||| | || || |||||||| | Sbjct 466910 GACACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGTGAGCGAGATCATGTCCATGAAGTCA 466969 Query 159701 AATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCC 159760 || |||||| | || | ||| ||||| ||||| || | |||| | ||| || Sbjct 466970 AACGGGTTCGCCGCGCGGTAGTGCTTCTCGTTCCCGAGCGCGACGAGCAGGCGGTCCGCG 467029 Query 159761 ACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGC 159820 || || |||||||| |||||| || ||| || || | ||| || |||||| Sbjct 467030 ACGAACTCGATGTACTGGCACATCAGCCGCGCGTTCATGCCGATGAGCGAGACCGGGAGC 467089 Query 159821 GCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAG-ACACG 159879 || |||| || ||||||||||| |||||||| || |||| || || | ||| || || Sbjct 467090 GCCTCCGTGAGGAACTCCTTCTCGATCTCGACGGCCTCGGCGACGATGCG-GAGCACGCG 467148 Query 159880 TTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTG 159939 | |||| | | ||||| || ||||||||||| |||||| || Sbjct 467149 GCGGGGGTGCGGCCGCCGGCGGAGGTGGTGG---AAGAGGAGGCACGCGAAGTCGGTATG 467205 Query 159940 CAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACG 159999 || |||||||| || ||||||| ||||||||| | ||||||| ||||||| ||| || Sbjct 467206 CATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGCCCGCG 467265 Query 160000 CGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGC 160059 | |||||||| || ||||| || || | ||| || |||| ||||| ||||| || Sbjct 467266 CTTCTTGAGCCAGAAGATGGCGGCGAACGAGCCGGAGAAGAAGACGCCCTCGACGGCGGC 467325 Query 160060 AAACGCCACGAGCCTCTCACCAAAAG-AG-GCGTTGGTGTCATGGGTCCACCTTTTGGCC 160117 ||||| ||||||| ||| |||||| || || | ||| | |||||| |||| Sbjct 467326 GAACGCGACGAGCCGCTCCGCAAAAGCAGAACGCT--CGTCCGCGATCCACCGGAGGGCC 467383 Query 160118 CATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGT 160160 || || |||||||| |||||| || ||| |||| ||||| Sbjct 467384 CAGTCGGCCTTCTTCTTGATGCAGGGTATGGTGTCGATGGCGT 467426 >seq2 Length=1603695 Score = 84.2 bits (92), Expect = 3e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 203841 TGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGG 203900 |||| || ||||||| || || | | | ||||| | | | ||| ||||||||||| | Sbjct 1473442 TGTCGACGGTGAACTTGATCGCCTGCGCCGCAGGACGCGTGCGCAGGTAGTACATGCCCG 1473383 Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960 |||| |||||||||| ||| ||||| | ||||||| | || | || | | ||||| Sbjct 1473382 TCTTCAGGCCCTTCTTCCAGCCGTAGAAGTGCATGCTCGTGAGCTGGCCCGTGGTGGGGG 1473323 Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCA 204020 | ||| | || || ||||| ||| |||||| | | ||||| ||||| | Sbjct 1473322 ACTGGAGGTGGACATTGAGCGACTGCGACTGGCAGATGAACGCTCCACGATCCGCGGCGA 1473263 Query 204021 TATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | | | |||||||||| |||||||| || |||||| Sbjct 1473262 GGTCAAGGACCTTCTTCTGCGAGATCTCCCAAACGGTCTTG 1473222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152158531360