Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8 361 5e-95 seq4 129 6e-25 seq29 114 1e-20 seq9 95.1 1e-14 seq13 86.0 6e-12 >seq8 Length=958091 Score = 361 bits (400), Expect = 5e-95 Identities = 556/783 (71%), Gaps = 15/783 (2%) Strand=Plus/Plus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAG 132722 ||| || || || ||||| || | | ||||||||| | | |||| | ||||||| Sbjct 466960 CATGAAGTCAAACGGGTTCGCCGCGCGGTAGTGCTTCTCGTTCCCGAGCG---CGACGAG 467016 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCA 132781 ||| | ||| || |||||||||||||| || |||| | ||| | | | || | | Sbjct 467017 CAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCCGCGCGTTCATG-CCGATGA 467075 Query 132782 GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 | ||||| ||||| || ||||| || | |||||| |||| || |||| ||||| Sbjct 467076 GCGAGACCGGGAGCGCCTCCGTGAGGAACTCCTTCTCGATCTCGACGGCCTCGGCGACGA 467135 Query 132842 TTTCCCTAACGCGCGCCGCGCT-CGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCA 132900 | ||||| || | | | |||||| | | || | ||| | | ||| || Sbjct 467136 TGCGGAGCACGCG-GCGGGGGTGCGGCCGCCGGCGGAGGTGGTGGAAGAGGAGGCACGCG 467194 Query 132901 AAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGC 132960 |||||| ||||| ||||||||| | ||| ||||| |||||| ||| || | ||||||| Sbjct 467195 AAGTCGGTATGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGC 467254 Query 132961 ATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCC 133020 ||||| ||||| || |||||||| || ||||||||||| ||| || |||||||||||| Sbjct 467255 ATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCGGCGAACGAGCCGGAGAAGAAGACGCCC 467314 Query 133021 TCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAG 133080 |||||||| ||||| || || || ||||| | || | | | | |||||||| Sbjct 467315 TCGACGGCGGCGAACGCGACGAGCCGCTCCGCAAAAGCAGAACGCTCGTCCGCGATCCAC 467374 Query 133081 CGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAA- 133139 || || ||||| |||||||| | |||| ||| || || || |||||||||| || | Sbjct 467375 CGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGTATGGTGTCGATGGCGTCGAAGAGG 467434 Query 133140 ACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGA 133199 | || | ||| | | | || | |||||||||||||||| ||| ||| | || | Sbjct 467435 AAGGCGCG-CTCGGCGGGGTCGCGGATGTAGGTGTCGATGAGGAGCGAGTACGTCTCGGC 467493 Query 133200 GTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCAC 133259 ||| |||||||| || |||||| ||||| |||||||| |||||||| | ||||||| Sbjct 467494 GTGCACGTTCTCGATCATGATTTGGAAGCCATAAAAGCAGCGCGCCTCCGCGGCCTGCAC 467553 Query 133260 TTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAA 133319 || | | ||| || || || || |||||||| |||||||| || |||||||||||| Sbjct 467554 CTCGTTGGAGAAGCGTTCCACGAGGTTTTCGTTCACGATGCCATCCGAGGCGGCGAAAAA 467613 Query 133320 GGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCG 133376 ||| ||||||| |||||| || |||||||||||||| | || | |||||| Sbjct 467614 GGCGAGCACGTAGGAGATGAAGTGCCGCTCGTTGTCGTTTAGCTTGCCATTCCAGTCCAT 467673 Query 133377 CGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436 ||| | || |||| | ||||||||| |||||||| ||||| | ||| | ||||| Sbjct 467674 AAGGTCATACGAGAGGTTAATCTCCTCGACTGTCCAAAAGGACGCTTGGGCAGTCTTGTA 467733 Query 133437 CAT 133439 ||| Sbjct 467734 CAT 467736 Score = 273 bits (302), Expect = 2e-68 Identities = 401/562 (71%), Gaps = 9/562 (2%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||| | ||| || || |||||| |||| |||||| || | ||| ||||| |||||| Sbjct 469684 TGAAGAGCAAACACGCGAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGG 469625 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| || | ||| ||||| | ||| || || |||||||| || |||| |||||| | Sbjct 469624 AGAACGTGAGGCCAGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGATC 469565 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || ||||||| ||||| || || ||||| || | || |||||| |||||| | | Sbjct 469564 CAGAGAAGAAGATACCCTCCACAGCGGCGAAGGCGATGAGACGCTCGGCGAACGCAGACT 469505 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | ||| || |||||||| || ||||| |||||||| | |||| ||| || || || | Sbjct 469504 CCTTGTCGGAAATCCAGCGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTGT 469445 Query 133124 CGATGGCGTTCAACAAACGGAGTTT-CTCTTC-CGAGGAACGC-ACGTAGGTGTCGATGA 133180 ||||||||| || | || | | | || || || | | |||||| || |||| Sbjct 469444 CGATGGCGTCGAAGA---GGTGCTCGCGCTGAGCGGGGTCCTTGATGTAGGTATCAATGA 469388 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 || ||| || | |||||||| | ||||||||| || || |||||||| ||||| | Sbjct 469387 GGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCAGC 469328 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 |||| || | |||| || || | | || | |||||| || || ||||||||||||| Sbjct 469327 GCGCTTCCGCTGCCTGAACCTCGTTGGAAAACCTCTCGACGAGGTTCTCGTTGACGATGC 469268 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT-- 133358 |||| |||||||| || || || |||||| ||||| | ||||| | |||| | Sbjct 469267 CGTCCGACGCGGCGAAGAATGCGAGGACGTGCGAAATGAAGTATCGCTCATCGTCGGTGA 469208 Query 133359 -CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACG 133417 | | | ||||||| || |||||||||| ||||| |||||| | ||||| || | Sbjct 469207 GCTTGTTGTTCCAGTCGTGCAGATCCTTGGACAAGTCCATCTCCTCTGCCGTCCAGAAGG 469148 Query 133418 ACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || |||||||| Sbjct 469147 ACGCCTCAGCCTTCTTGTACAT 469126 >seq4 Length=1487122 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || |||||||||||||| ||||||||| | || |||||| | || Sbjct 23779 ATGCAAATCTTCGTCAAGACGCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCTTCC 23720 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 23719 GACACGATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCA 23661 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||| |||| |||| || || || |||||||| Sbjct 23660 GCAGCGCTTGATCTTCGCCGGCAAGCAGTTGGAGGACGGACGTACTCTGTCGGACTACAA 23601 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| | ||||| || ||||| || ||| || | || || Sbjct 23600 CATTCAGAAGGAGTCCACGCTTCACTTGGTCCTTCGTCTGCGCGGTGG 23553 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| || || ||||| || | || || ||| || | Sbjct 23551 ATGCAGATCTTCGTCAAGACGCTCACAGGGAAGACCATTACGCTGGAGGTTGAGTCCTCG 23492 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 23491 GACACGATCGACAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCA 23433 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | ||| || || ||| |||| |||| ||||| ||| ||||||||| Sbjct 23432 GCAACGTCTTATCTTCGCTGGGAAGCAGTTGGAGGACGGCCGCACGCTCTCCGACTACAA 23373 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 |||||| ||||| ||||||| || Sbjct 23372 CATCCAGAAGGAGTCGACGCTTCA 23349 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| |||| || ||| | | Sbjct 24288 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTTGAGTCGTCG 24229 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | || |||| ||||| ||||| || || ||||||| Sbjct 24228 GACACCATCGACAATGTTAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 24169 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | ||||| | ||||||||| Sbjct 24168 CAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACGTTGTCAGACTACAAC 24109 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || ||| | || ||||| Sbjct 24108 ATCCAGAAGGAGTCCACCCTCCATCTCGTTCTGCG 24074 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | || ||||| || ||||| | || |||||| | | Sbjct 24060 ATGCAGATCTTCGTGAAGACGTTGACCGGCAAGACGATCACGCTGGAGGTCGAGTCTTCT 24001 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || | || || | || || |||||||| |||||| |||| Sbjct 24000 GACACCATCGACAACG-TCAAGGCCAAGATTCAGGATAAGGAGGGAAT-CCCGCCAGACC 23943 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| || | ||||| | ||||||| Sbjct 23942 AGCAGCGTCTTATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGTTGTCGGACTACA 23883 Query 38422 ACATCCAAAAGGA 38434 ||||||| ||||| Sbjct 23882 ACATCCAGAAGGA 23870 >seq29 Length=419596 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| ||||||||| |||| |||||| | || Sbjct 160752 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 160811 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || || | ||||| ||||| ||||| ||||||| Sbjct 160812 GACACCATCGACAACG-TCAAGGCGAAGATTCAAGACAAGGAGGGCATTCCGCCCGACCA 160870 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | |||| ||| ||||| ||||| || || | ||||| || |||||||| Sbjct 160871 GCAGCGCTTGATTTTCGCAGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCGGACTACAA 160930 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||| || || | || || ||| Sbjct 160931 CATCCAGAAGGAGTCGACCCTCCACCTCGTTCTTCGT 160967 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| ||||| || ||||| | || |||||| | | Sbjct 160980 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACGATCACGTTGGAGGTCGAGTCTTCG 161039 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || || ||||||| Sbjct 161040 GACACGATCGATAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 161099 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| ||||| || |||| || || ||| ||||||||| Sbjct 161100 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACGCTCTCGGACTACAAC 161159 Query 38424 ATCCAAAAGGA 38434 ||||| ||||| Sbjct 161160 ATCCAGAAGGA 161170 >seq9 Length=891578 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 || ||| ||||||| ||||| || || | ||||||||| ||||| || || | |||||| Sbjct 319804 ATCCCCCCCGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACC 319863 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| ||||||||||||||| ||||| | || || || ||||||| || Sbjct 319864 CTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCG 319913 >seq13 Length=709687 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 || ||| ||||||| ||||| || || | ||| ||||| ||||| || |||| || ||| Sbjct 148094 ATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACC 148035 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| ||||||||||||||| ||||| | || || || | ||||| || Sbjct 148034 CTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTTGTGCTCCG 147985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170886839040