Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-26 >seq8 Length=958091 Score = 134 bits (148), Expect = 2e-26 Identities = 172/233 (74%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTA 102144 |||| ||||| || |||||| | || |||| || || | ||||| || || |||||| Sbjct 469424 AGCACCTCTTCGACGCCATCGACACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCTC 469483 Query 102145 TGAAGTGG-TTTGATACAA--AGTC-GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCG 102200 | ||| ||| |||| |||| |||||| || ||||| ||| |||| || || Sbjct 469484 TTCGCTGGATTTCCGACAAGGAGTCTGCGTTC----GCCGAGCGTCTCATCGCCTTCGCC 469539 Query 102201 TGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGA 102260 ||| |||||||||||||||||||| |||||| | | || | |||||||||||||| Sbjct 469540 GCTGTGGAGGGTATCTTCTTCTCTGGATCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGT 469599 Query 102261 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 || | ||||| || ||| |||||||||||||| ||||| || || ||||| Sbjct 469600 GGCTTGATGCCTGGCCTCACGTTCTCCAACGAGCTCATCTCCCGCGATGAGGG 469652 Score = 113 bits (124), Expect = 6e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 ||||| ||||| ||| |||| || || || ||||| |||||||||| || || ||| Sbjct 467349 TTTGCGGAGCGGCTCGTCGCGTTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGCTCGTTC 467290 Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293 ||| || | |||||||||||||| || |||||||| || ||| |||||||||||| Sbjct 467289 GCCGCCATCTTCTGGCTCAAGAAGCGCGGGCTCATGCCCGGCCTCACGTTCTCCAACGAG 467230 Query 102294 CTTATCTCTCGTGACGAGGG 102313 || ||||| || |||||||| Sbjct 467229 CTCATCTCCCGCGACGAGGG 467210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740025660320