Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8 199 7e-46 seq2 113 8e-20 >seq8 Length=958091 Score = 199 bits (220), Expect = 7e-46 Identities = 394/573 (69%), Gaps = 19/573 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| |||||||||||| || ||| || ||||| | ||| |||||| | || Sbjct 467745 ATATGGCAGATGTACAAGACTGCCCAAGCGTCCTTTTGGACAGTCGAGGAGATTAACCTC 467686 Query 25537 GCCAAGGAC---ATGGACGGC--TGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | | ||| |||||| | ||| | ||| | | | |||||| ||| || || Sbjct 467685 TCGTATGACCTTATGGACTGGAATGGCAAGCTAAA--CGACAACGAGCGGCACTTCATCT 467628 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT-GTGCGAG 25650 |||||| | || || || || ||||| ||||| || |||||||| || || ||| || Sbjct 467627 CCTACGTGCTCGCCTTTTTCGCCGCCTCGGATGGCATCGTGAACGAAAACCTCGTG-GAA 467569 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | ||| ||| || |||||| || |||||| || || || || ||||| || Sbjct 467568 CGCTTCTCCAACGAGGTGCAGGCCGCGGAGGCGCGCTGCTTTTATGGCTTCCAAATCATG 467509 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 ||||| || |||||| | ||| ||| | ||| || || || ||||| ||| Sbjct 467508 ATCGAGAACGTGCACGCCGAGACGTACTC---GCTCCTCATCGACACCTACATCCGCGAC 467452 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 ||||||| | | || || | |||||||| ||||||| ||||||||| |||| Sbjct 467451 CCCGCCGAGCGCGCCTTCCTCTTCGACGCCATCGACACCATACCCTGCATCAAGAAGAAG 467392 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG--CTACGTTTGGCGAGCGGCTGG 25885 || |||||| | ||||||| | | | ||||| || | |||| |||||||| | Sbjct 467391 GCCGACTGGGCCCTCCGGTGGATCG-CGGAC-GAGCGTTCTGCTTTTGCGGAGCGGCTCG 467334 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | || || || || || |||||| |||| ||| ||| ||||| || ||||||||||||| Sbjct 467333 TCGCGTTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGCTCGTTCGCCGCCATCTTCTGGC 467274 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 ||||| || ||| ||||||||| || || ||||||||||||||| | | |||| Sbjct 467273 TCAAGAAGCGCGGGCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCTCCCGCGACG 467214 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 |||| | || | || || || ||||| |||| Sbjct 467213 AGGGCATGCATACCGACTTCGCGTGCCTCCTCT 467181 Score = 159 bits (176), Expect = 6e-34 Identities = 431/655 (66%), Gaps = 22/655 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| ||||||||||||||||| | || |||||| || || ||||| || || Sbjct 469117 ATCTGGCAGATGTACAAGAAGGCTGAGGCGTCCTTCTGGACGGCAGAGGAGATGGACTTG 469176 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||| || ||| |||| || |||| || | || |||| | || | Sbjct 469177 TCCAAGGATCTGCACGACTGGAACAACAAGCTCA--CCGACGATGAGCGATACTTCATTT 469234 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | |||| | |||||||| || || || || || || || |||||||| || ||||| Sbjct 469235 CGCACGTCCTCGCATTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTCGTCGAGA 469294 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | || ||| || || ||| | ||| || || |||||||| |||||||| | Sbjct 469295 GGTTTTCCAACGAGGTTCAGGCAGCGGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGA 469354 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 | || || | ||||| ||| || | ||| || || || ||||| | ||| Sbjct 469355 TGGAGAACATCCACTCGGAGACCTACTC---GCTCCTCATTGATACCTACATCAAGGACC 469411 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 ||| || | || | || || | |||||||| ||| || ||||||||| ||||| Sbjct 469412 CCGCTCAGCGCGAGCACCTCTTCGACGCCATCGACACCATTCCTTGCATCAAGAAGAAGG 469471 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | ||||| | ||||| | | || || |||| | |||||| || | | Sbjct 469472 CCGACTGGGCTCTTCGCTGGATTTCCGACAAGGAGTCTGCGTTCGCCGAGCGTCTCATCG 469531 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 |||| || ||||||||||| ||||| ||| || || || || ||||||||||||||| Sbjct 469532 CCTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGATCCTTCGCCTCCATCTTCTGGCTCA 469591 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || ||||| || || || ||||||||||||||| | | || |||| Sbjct 469592 AGAAGCGTGGCTTGATGCCTGGCCTCACGTTCTCCAACGAGCTCATCTCCCGCGATGAGG 469651 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 | | |||| || || || || |||||| || |||| ||| | | | | ||| Sbjct 469652 GCATGCACACCGACTTCGCGTGTTTGCTCTTCA---GCCA---TCTCAAGAGGCGTCCTC 469705 Query 26069 A---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 | |||| |||| | ||||| | ||||| || ||||| ||| ||||||| Sbjct 469706 ATCCCGAGATCGTCCTCCAAATCATTCAGGAGGCGGTCGAGATTGAGCAGGAGTT 469760 >seq2 Length=1603695 Score = 113 bits (124), Expect = 8e-20 Identities = 214/306 (70%), Gaps = 12/306 (4%) Strand=Plus/Minus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC 221419 ||||| || | ||||| |||||||| |||||| | | ||| | || | || || Sbjct 1472811 GGACTGCCCTTGTACGTCTCGTAGGTACCGTATTGCTGCGCCATCTCACA-GCTGGCCTC 1472753 Query 221420 -AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGG 221475 | || |||||||||||||||||||||||| || |||||| |||| |||||||| Sbjct 1472752 GACCGCCGCGTGGTAGATGGTCTCAAAGATCTGCTGGTTGAG---CTTGCGTGCCTCGGG 1472696 Query 221476 AGAAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534 ||| |||||||| ||| ||| | |||| | |||| ||||| || || || |||| || Sbjct 1472695 AGAGTCGAAGGGCAGACGAAGCGCCATGAACG-CGTCCGCCAGACCTTGCACACCGACAC 1472637 Query 221535 CGATGGGCCTGTGTCTCCTGTTGGAAGCG-GCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 |||| || | ||| | | |||||| |||| || || || | || || |||||| Sbjct 1472636 CGATAGGGCGGTGACGCATGTTGG-AGCGCTTAGCCTCAGGGATTGGGTAGTGGTTGACA 1472578 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||||||| | | || || || || ||| |||||||||| | Sbjct 1472577 TCGATGATGCGGTTGAGGTTGAAGGCGACCACCTTCGTAACGTCGTGCAGCTTCTGGAAA 1472518 Query 221654 TTGAAC 221659 ||| || Sbjct 1472517 TTGTAC 1472512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841247168640