Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 1e-14 >seq8 Length=958091 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 64982 AGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAA 65041 |||| | || || |||||| | || | || || || |||||||||| | ||||| Sbjct 469424 AGCACCTCTTCGACGCCATCGACACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCTC 469483 Query 65042 TGAAATGGTTTGAC-ACAA--AGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGT 65098 | ||| || | |||| ||||| | ||||||||||| || | || || || Sbjct 469484 TTCGCTGGATTTCCGACAAGGAGTCTG---CGTTCGCCGAGCGTCTCATCGCCTTCGCCG 469540 Query 65099 GTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGG 65158 ||||||||||||||||||||| || || ||| | | || | ||| | |||||||| | Sbjct 469541 CTGTGGAGGGTATCTTCTTCTCTGGATCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTG 469600 Query 65159 GTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGG 65210 | | ||||| ||||| ||||| || || || || ||||| |||||||| Sbjct 469601 GCTTGATGCCTGGCCTCACGTTCTCCAACGAGCTCATCTCCCGCGATGAGGG 469652 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 || || ||||| || | ||||| || || ||||| ||||||||||||| || ||| Sbjct 467349 TTTGCGGAGCGGCTCGTCGCGTTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGCTCGTTC 467290 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 ||| || | ||| | |||||||| || |||||||| ||||| ||||| || || Sbjct 467289 GCCGCCATCTTCTGGCTCAAGAAGCGCGGGCTCATGCCCGGCCTCACGTTCTCCAACGAG 467230 Query 65191 CTTATTTCCCGAGATGAGGG 65210 || || ||||| || ||||| Sbjct 467229 CTCATCTCCCGCGACGAGGG 467210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567318121280