Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq66 95.1 4e-14 >seq66 Length=161137 Score = 95.1 bits (104), Expect = 4e-14 Identities = 171/248 (69%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||||| | ||| | | |||||||| || ||||| || | || || ||||| Sbjct 71909 GTCTTCCAGAGCCTTTACGAGTCGACGCTGGATGTAACCCGTCTCGGCAGTCTTGACAGC 71850 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690 |||||||| ||||| ||||||| |||| || |||||||| | ||| | || || Sbjct 71849 GGTATCAATAAGACCTTCACGACCGGCCATGGCGTGGAAGAAGAACTCCTGGGGGGTAAG 71790 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC--GAATCGTCGAACTTG 302748 || | || | ||| |||| ||||| || || ||||| || ||| |||| ||| Sbjct 71789 TCCTCGAAGGTACGAGTTCTCGACGAACCCGCGAGCCTCTGGACTGAA--GTCGTCCTTC 71732 Query 302749 GTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTC 302808 || ||||| || || || | | ||||| | |||||||||||||| || ||| | Sbjct 71731 GTGAAGTGGGGGAGCGTACGATGACGGAAGCCGAACGGGATACGCTTTCCTTCGACGGAC 71672 Query 302809 TGCTGTCC 302816 ||||| || Sbjct 71671 TGCTGCCC 71664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471811829555122