Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq8 134 1e-26 >seq8 Length=958091 Score = 134 bits (148), Expect = 1e-26 Identities = 193/272 (71%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || |||||||| || | || || |||| ||| ||||| |||||| || || ||| Sbjct 860525 TCCGTCTCCGGATTCTTGCACGCCTTGCACAGCACGAACTTCTCGATGAAGCCGTCGAGC 860584 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 || || | | ||| | |||||| | ||||| |||||| | || ||||| || | Sbjct 860585 AGCTCGCGGAGCTTGGTAGCGTCGTGCGCACCGTTAACGATGTAGCGATCGTTCTTCTCG 860644 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 |||| || |||||||| ||||| ||||||||| |||| || ||||| ||| ||| Sbjct 860645 TCGAGAACGGTCTGCGCGCCGAGCTCACACCCGAAGAACTTAGTGGGGTACGTGGGCGGG 860704 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || | ||||| ||| | |||| |||||| ||||| |||||||| ||||||||| Sbjct 860705 CGGCTGAGCGCGCGGGCCACGTCGGACATGTTCGGAATGACGGTCTTGATACCGTTGCCC 860764 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCAT 34589 || || |||| ||||| ||| | |||||| Sbjct 860765 TTGCCCTCGATCTTGGTCAAGAGGACCGGCAT 860796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840060358858