Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4 134 9e-27 seq29 132 3e-26 seq9 82.4 5e-11 >seq4 Length=1487122 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| ||||||||||||||| |||||||| || | || | || Sbjct 23568 AGGACCAAGTGAAGCGTGGACTCCTTCTGAATGTTGTAGTCCGACAGAGTACGTCCGTCC 23627 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| ||||||||||||| || |||||||| | || | ||||||||||| Sbjct 23628 TCCAACTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCT 23687 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| |||||| Sbjct 23688 TGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAAGGTGATGGTC 23747 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| ||||| || ||||| ||||| Sbjct 23748 TTGCCCGTGAGCGTCTTGACGAAGATTTGCAT 23779 Score = 120 bits (132), Expect = 2e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||||||| ||||| |||||||| | |||| |||| ||||| Sbjct 23855 AGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTGCGACCATCCTCCAGC 23914 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||||||||| || || ||||||||| |||| | |||||||| || | || Sbjct 23915 TGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGCGGGATTCCCTCCTTATCCTGAATC 23974 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | ||| | |||||| || | || || ||||| || Sbjct 23975 TTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCCAGCGTGATCGTCTTGCCG 24034 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| || ||||||||||| Sbjct 24035 GTCAACGTCTTCACGAAGATCTGCAT 24060 Score = 116 bits (128), Expect = 2e-21 Identities = 158/218 (72%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || || | |||| ||||||||| ||||| ||||| || | |||| |||| Sbjct 24076 CAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAACGTGCGACCATC 24135 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| || || |||||||| |||| | ||||||||||| Sbjct 24136 CTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 24195 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || || || || | ||||| || | ||| || || | ||| | Sbjct 24196 CTGGATCTTCGCCTTAAC--AT--TGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGA 24251 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | ||||| |||||||||||||| || |||||||||||| Sbjct 24252 TCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 24289 Score = 114 bits (126), Expect = 8e-21 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| || ||||||||| ||||| ||||| || || |||| | || |||| Sbjct 23346 AGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCCAAC 23405 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || |||||||| || ||||||||||| | || | |||||||||||| | || Sbjct 23406 TGCTTCCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATC 23465 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | |||| || || ||| || || | || |||||||| || Sbjct 23466 TTCGCCTTCACGTTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTAATGGTCTTCCCT 23525 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || ||||||||||| Sbjct 23526 GTGAGCGTCTTGACGAAGATCTGCAT 23551 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||||||| ||||| ||||| || || |||| | || Sbjct 24305 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCC 24364 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| || ||||||||||| || |||||||| Sbjct 24365 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTC 24402 >seq29 Length=419596 Score = 132 bits (146), Expect = 3e-26 Identities = 161/217 (74%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||||||||||||||| ||||| |||||||| || | || | || Sbjct 161191 AGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGGCCGTCC 161132 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| |||| | ||||||||||| Sbjct 161131 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCC 161072 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || ||||||| || | |||||| || | || || Sbjct 161071 TGGATCTTCGCCTTCAC--AT--TATCGATCGTGTCCGAAGACTCGACCTCCAACGTGAT 161016 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || ||||| ||||| || |||||||||||| Sbjct 161015 CGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATG 160979 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||| ||||| |||||||| || |||| |||| Sbjct 160963 AGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 160904 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||| |||| || |||||||| |||| | ||||||||||| Sbjct 160903 TCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCT 160844 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||||| || | ||| |||||| Sbjct 160843 TGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 160784 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| |||||||||||||| Sbjct 160783 TTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 160752 Score = 89.7 bits (98), Expect = 3e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||| ||||||||||||||| ||||| || ||| ||||| | || || || Sbjct 160676 AGGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGCCCGTCCTCGAGC 160617 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||| ||||||||||| || || |||||||| Sbjct 160616 TGCTTCCCGGCGAAGATGAGACGCTGCTGGTC 160585 >seq9 Length=891578 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| ||||| ||| |||| |||| Sbjct 319910 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCC 319851 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| || ||||||||||| || |||||||| Sbjct 319850 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTC 319813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691585369414