Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq31 95.1 4e-15 >seq31 Length=367729 Score = 95.1 bits (104), Expect = 4e-15 Identities = 157/223 (70%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 11634 ATCTACTTCCCCCACAACCTCGACTTCCGTGGCCGAGCCTACCCGGTGCC---GGATGTC 11690 |||||| |||| |||||| |||||||||||||||| || ||||| | || | || Sbjct 340379 ATCTACCTCCCGCACAACGTCGACTTCCGTGGCCGCGCGTACCCCATCCCTCCGCAT--- 340323 Query 11691 CTGAACCCGCAGGGCAGCGACCCCGTTAAGGCGCTT-CTCAGGTTCGCCGAGGGGAAGCC 11749 |||| || ||| ||||| || || |||| ||| ||| | |||| |||||| Sbjct 340322 CTGAGCCACATTGGCGACGACCT-GTCGAGAGGCTTGCTCTTGTTTGGTGAGGCGAAGCC 340264 Query 11750 TCTCGGGGCGGATGGCGCGCGCTGGCTCATGATCCACGGCGCGAACACGTTCGGCATCGA 11809 ||||| || ||| ||||||||| | ||||||| |||||| | ||| ||| Sbjct 340263 GCTCGGAGCTCGTGGTCTGCGCTGGCTGAAGATCCACCTGGCGAACTTGGCCGGGTACGA 340204 Query 11810 CAAGGTGTCCTTCACCGAGCGCGTCGAGTGGGTTCAGGAGAAC 11852 ||||| | |||| |||||||||||||| || || ||| || Sbjct 340203 CAAGGCGAGCTTCGACGAGCGCGTCGAGTTCGTGCACGAGCAC 340161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146175468832960