Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 8e-12 >seq8 Length=958091 Score = 86.0 bits (94), Expect = 8e-12 Identities = 325/504 (64%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||| ||||| || || || || ||||| || || ||||| | || |||||| Sbjct 469652 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAACGTGAGGCCAGGCATCAAGCCACGCTTC 469593 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 || | ||| | || | | ||| || || ||||||||||||||||||||| || || Sbjct 469592 TTGAGCCAGAAGATGGAGGCGAAGGATCCAGAGAAGAAGATACCCTCCACAGCGGCGAAG 469533 Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACT--TTG-CATCAAACCATTTCATTGCCCAT 122853 || | || || |||||||| | ||||| ||| | || ||| | ||||| Sbjct 469532 GCGATGAGACGCTCGGCGAACG---CAGACTCCTTGTCGGAAATCCAGCGAAGAGCCCAG 469476 Query 122854 TTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTCA 122913 | |||||||||| || || || | || | |||||| || || | |||| | | Sbjct 469475 TCGGCCTTCTTCTTGATGCAAGGAATGGTGTCGATGGCGTCGAAGAGGTGCTCGCGCTGA 469416 Query 122914 GATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT-TTC 122972 | ||||| ||||| | ||||| | || || || || || | | | | Sbjct 469415 GCGGGGTCCTTGATGTAGGTATCAATGAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCC 469356 Query 122973 ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCGCAAA 123032 || || | || | ||||||| |||||||||| | ||||||||| | | ||| Sbjct 469355 ATCATAATCTGGA-AGCCGTAGAAGCAGCGCGCTTCCGCTGCCTGAACCTCGTTGGAAAA 469297 Query 123033 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATGTA 123092 | | || ||||| || || || || ||| | || |||||||| |||| || Sbjct 469296 CCTCTCGACGAGGTTCTCGTTGACGATGCCGTCCGACGCGGCGAAGAATGCGAGGACGTG 469237 Query 123093 CTTTATGAATTTCTTTTCATTTTCATTCAG---GGTCTTCCAGTCGTCAAGATCTTTGGA 123149 | ||||| | |||| || | || | | |||||||||| ||||| ||||| Sbjct 469236 CGAAATGAAGTATCGCTCATCGTCGGTGAGCTTGTTGTTCCAGTCGTGCAGATCCTTGGA 469177 Query 123150 CAAATCAACTTCTTCCGCAGTCCA 123173 ||| || | || || || ||||| Sbjct 469176 CAAGTCCATCTCCTCTGCCGTCCA 469153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029597777600