Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-26 >seq8 Length=958091 Score = 134 bits (148), Expect = 2e-26 Identities = 172/233 (74%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTA 94768 |||| ||||| || |||||| | || |||| || || | ||||| || || |||||| Sbjct 469424 AGCACCTCTTCGACGCCATCGACACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCTC 469483 Query 94769 TGAAGTGG-TTTGATACAA--AGTC-GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCG 94824 | ||| ||| |||| |||| |||||| || ||||| ||| |||| || || Sbjct 469484 TTCGCTGGATTTCCGACAAGGAGTCTGCGTTC----GCCGAGCGTCTCATCGCCTTCGCC 469539 Query 94825 TGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGA 94884 ||| |||||||||||||||||||| |||||| | | || | |||||||||||||| Sbjct 469540 GCTGTGGAGGGTATCTTCTTCTCTGGATCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGT 469599 Query 94885 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 || | ||||| || ||| |||||||||||||| ||||| || || ||||| Sbjct 469600 GGCTTGATGCCTGGCCTCACGTTCTCCAACGAGCTCATCTCCCGCGATGAGGG 469652 Score = 113 bits (124), Expect = 5e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 ||||| ||||| ||| |||| || || || ||||| |||||||||| || || ||| Sbjct 467349 TTTGCGGAGCGGCTCGTCGCGTTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGCTCGTTC 467290 Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917 ||| || | |||||||||||||| || |||||||| || ||| |||||||||||| Sbjct 467289 GCCGCCATCTTCTGGCTCAAGAAGCGCGGGCTCATGCCCGGCCTCACGTTCTCCAACGAG 467230 Query 94918 CTTATCTCTCGTGACGAGGG 94937 || ||||| || |||||||| Sbjct 467229 CTCATCTCCCGCGACGAGGG 467210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258569027440