Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3392 114 3e-20 seq3359 109 1e-18 >seq3392 Length=91092 Score = 114 bits (126), Expect = 3e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 230370 CGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGA 230429 |||||| ||| || | ||||| || || || | | ||| |||||||| || ||| Sbjct 44447 CGAGACCGTCGAAAAGATCATCCGCGAGGCCGTCAAGATCGAGCAGGAGTTCCTTACTGA 44388 Query 230430 CGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAAT 230488 ||| | || ||| | || || ||||||||| | |||| ||| | ||||||||||| | Sbjct 44387 CGCCCTGCCC-GTCTCGCTCATCGGCATGAACTCGAAACTCATGTGCCAGTACATCGAGT 44329 Query 230489 TCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACC 230548 |||| ||||||||| | | || || || || ||||||| || | ||| | |||| Sbjct 44328 TCGTCGCCGACCGCCTGCTCGTCGCTCTCGGCAACGAGAAGGTCTGGAACGTCAGCAACC 44269 Query 230549 CCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGA 230600 |||| | || |||||| | || || || || || ||| ||||||||||||| Sbjct 44268 CCTTCGACTTCATGGAGATGATCTCTCTCCAGGGCAAGGCCAACTTCTTCGA 44217 >seq3359 Length=24196 Score = 109 bits (120), Expect = 1e-18 Identities = 282/422 (67%), Gaps = 6/422 (1%) Strand=Plus/Minus Query 230182 CGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATC 230241 || ||||| || | | |||||||| || || | ||||||||| ||| ||||||| Sbjct 3994 CGCCTCGTTGCGTTTGCCTGTGTTGAGGGCATCTTCTTTTCCGGGTCATTCGCCGCCATC 3935 Query 230242 TTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGT 230301 || ||||| ||| | ||| | ||||| |||||| | || || ||| ||||||| Sbjct 3934 TTCTGGCTCAAGAAGAGGGGTCTTATGCCAGGCCTCACCTTCTCGAATGAGCTCATCAGC 3875 Query 230302 CGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAGAACAA 230360 ||||| ||||| || | | |||| | |||| | || | ||| || | Sbjct 3874 CGCGATGAGGGCACACACACAGACTTCG-CATGCTTGCTCTACGATCACCTCAAGCATC- 3817 Query 230361 GCTAC-CATTCGA-GACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAG 230418 ||| || |||| |||| || || ||| || | || || || | || ||| |||||| Sbjct 3816 GCTGTTCAGTCGATGACGTACAC-CACATCGTTTCCGAGGCGGTCGCAATCGAGAAGGAG 3758 Query 230419 TTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAG 230478 ||| | |||||| | || || | || |||||||| |||||| | || ||| || Sbjct 3757 TTCCTGATCGACGCTTTGCCTTGCCAGCTCATTGGCATAAACGCTCATCTCATGTCGCAA 3698 Query 230479 TACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAAC 230538 |||||||| || || || || ||| | | | | || || | | ||| | |||||| Sbjct 3697 TACATCGAGTTTGTTGCGGATCGCTTGGTCGAGTCGCTGGGATGCCCCAAAATATACAAC 3638 Query 230539 TCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTC 230598 | | || || || | | ||||||||||| || || ||||| ||| | ||||||||| Sbjct 3637 ACGACAAATCCTTTCGATTGGATGGAGCTCATATCCCTCCAAGGCAAGGCAAACTTCTTC 3578 Query 230599 GA 230600 || Sbjct 3577 GA 3576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057776536098260