Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2769 167 3e-36 >seq2769 Length=42269 Score = 167 bits (184), Expect = 3e-36 Identities = 429/667 (64%), Gaps = 75/667 (11%) Strand=Plus/Plus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||||| ||| || || ||||| |||| | || || ||||||||||||| | Sbjct 4188 CAGCTGGATCTTGAGCGGGTCCACATGGTCCCGATACACATGCGCGTCCCCCATCTGCAG 4247 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 ||| || || | ||| | | |||| | ||||| ||||| |||| |||| ||| Sbjct 4248 GATAAACTCGTGCGCGTCGCAGTCGGTGATATAGGCGATCATGTGCGTCAAGAGGGCGTA 4307 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||| |||||||| ||||| || || |||| ||| | ||||||||| |||| | |||| Sbjct 4308 CGAGGCAATGTTGAACGGCACGCCGAGGCCCAGGTCGCACGAGCGCTGATACATCAGGCA 4367 Query 145851 GGAGAGCTCC--CCGCCCGCCA-------------------CGTAGAACTGGCACAGGAG 145889 ||||||| | |||| ||||| || |||||||||| | | Sbjct 4368 AGAGAGCTTCGGCCGCGCGCCAGCGCTCTCGGGGAGGGTGACGAAGAACTGGCAGAACAT 4427 Query 145890 GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC----------------------- 145926 |||||| ||||| ||||||||| |||||||| | | Sbjct 4428 GTGGCAAGGCGGGAGGGCCATGAGCGGCAGGTCTGGCATCAGCACCCCATCGAGGAGCAT 4487 Query 145927 ---------------------------GGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC 145959 |||||||| ||| | || |||| || |||| | Sbjct 4488 TGTGTGGAAGAAGGGGGGGCACCCTTCGGGTTCCACGCGCTCAGCACGATCCGCCTGTCC 4547 Query 145960 TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGG 146019 |||||| | |||||| | | | ||| |||||||||||| ||||| ||| Sbjct 4548 GTCGGGTTCTCCCTGATCTTGCGCACGACCTCCGCGAGCTGGTCCACCCCCTGGCCCGCA 4607 Query 146020 TAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGAC 146078 ||||| || | | |||| |||||| || || || |||| |||||| |||||||| || Sbjct 4608 TAATCGTCCTCGCACGTCC-CGTACGGAGCGCCAAAATGCCGCCACTGAAACCCGTACAC 4666 Query 146079 GGGCCCCAGGTC-CCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGG 146137 ||||||||||| ||| || || || || || || | ||| ||||| | |||| | Sbjct 4667 CGGCCCCAGGTCGCCCTCGC-GCCGATGACCAAGGCCCACGCGGTCGAGGTACTCCCTGC 4725 Query 146138 ACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACC 146197 |||||| | |||||||| || || ||| |||| |||| ||| ||||||| ||| Sbjct 4726 TGCCGTTGCCTTCCCAGATATTCACCCCCTGCGCGCTGAGCCGCTTGCCGTCCGTGCACC 4785 Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257 | || | |||||| |||||||| || || || | | ||| || | |||||| || | Sbjct 4786 CGCTCACGAACCACAGCAGCTCCTCCCATACGCCGCGCAGGAACACGCGCTTGGTCGTGA 4845 Query 146258 GCAGGGG 146264 |||| || Sbjct 4846 GCAGCGG 4852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590050969388080