Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3349 120 7e-22 seq3392 84.2 5e-11 >seq3349 Length=4469 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| ||||| | ||||||| | ||||| |||||||| ||| | ||||| ||||| || Sbjct 1316 CTGCCCGCCGTACAAGCTCATCATCCTCGACGAGGCCGACTCGATGACCCAGGACGCCCA 1257 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 ||| ||||| ||||| | ||||||||| |||| | ||||| || ||||| ||||| Sbjct 1256 GTCGGCCCTGCGCCGCATCATGGAGACGTACTCGCGCATCACGCGCTTCTGCCTCGTGTG 1197 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAG 254380 |||||| || || ||||| | || | || || || ||| |||||||||| |||| Sbjct 1196 CAACTATGTCACGCGCATCATTGAGCCCGTCGCCTCGCGCTGCTCCAAGTTTCGCTTCAA 1137 Query 254381 CACCCTCGCGC 254391 | ||||||| Sbjct 1136 GCCGCTCGCGC 1126 >seq3392 Length=91092 Score = 84.2 bits (92), Expect = 5e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 157276 CTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGGTTGGC 157335 ||| || ||||||| ||| ||||||||||| ||||| ||||| | ||||| |||||| Sbjct 44216 CTCGAAGAAGTTGGCCTTGCCCTGGAGAGAGATCATCTCCATGAAGTCGAAGGGGTTGCT 44275 Query 157336 GCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTAGTCCGCCACAAACTTGAT 157395 | ||| | ||||| |||| || || | ||| | ||| || || |||| ||| Sbjct 44276 GACGTTCCAGACCTTCTCGTTGCCGAGAGCGACGAGCAGGCGGTCGGCGACGAACTCGAT 44335 Query 157396 GTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCGACGGGAAGCGC 157446 ||||| |||| ||| | | || |||||||||| |||||| || || Sbjct 44336 GTACTGGCACATGAGTTTCGAGTTCATGCCGATGAGCGAGACGGGCAGGGC 44386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073718220772736