Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1820 84.2 2e-11 >seq1820 Length=19797 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||| || || |||||||| ||| ||| || |||| || ||||| Sbjct 341 GTGGAGGGTGGACTCTTTTTGGATGTTGTAATCGGAAAGTGTACGGCCGTCCTCGAGTTG 282 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | || || ||||| || || | |||||||||||| || || Sbjct 281 CTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 222 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||| || || | ||| ||||||||||| || Sbjct 221 GGCCTTGACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGGGTGATCGTCTTGCCAGT 162 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||| ||||| ||||| Sbjct 161 AAGGGTCTTCACGAAGATCTGCAT 138 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||||||| |||| ||| | || || Sbjct 1077 ACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCG 1018 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCC 45238 || || || |||||||| ||||| ||||| ||||| || || | |||||| Sbjct 1017 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGAATGCCCTCC 967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395058337943542