Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq1820 95.1 1e-14 >seq1820 Length=19797 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || ||| | || ||||| ||||| ||| |||| ||||| || ||| Sbjct 138 ATGCAGATCTTCGTGAAGACCCTTACTGGCAAGACGATCACCCTCGAAGTCGAGTCCAGC 197 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | ||| |||| || || | || || ||| | ||| ||||||| Sbjct 198 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 257 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||| | || | || ||||| ||||| || || | || | |||||||| | Sbjct 258 CAACGTCTCATCTTCGCTGGCAAGCAACTCGAGGACGGCCGTACACTTTCCGATTACAAC 317 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || || |||||| |||| || || | ||| | || | ||||| || Sbjct 318 ATCCAAAAAGAGTCCACCCTCCACCTTGTGCTCCGTCTCCGCGGTGG 364 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || ||||| | |||||||| || || || |||| |||||||| Sbjct 366 ATGCAGATCTTCGTGAAAACGCTTACCGGCAAGACCATCACTCTCGAGGTCGAATCATCT 425 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | || | || |||| ||| || | ||||| || | ||| ||||||| Sbjct 426 GACACTATCGACAACGTGAAGGCAAAGATCCAGGATAAAGAGGGTATTCCGCCTGACCAG 485 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||| | || | || ||||| || ||||||| | || | ||| |||| | Sbjct 486 CAACGTCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGCACCCTCTCCGACTACAAC 545 Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034 || ||||||||| | || ||||| Sbjct 546 ATCCAGAAAGAGTCGACCCTTCA 568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418286146523840