Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1542 214 2e-50 seq3392 178 1e-39 seq1820 129 5e-25 >seq1542 Length=14377 Score = 214 bits (236), Expect = 2e-50 Identities = 1044/1646 (63%), Gaps = 36/1646 (2%) Strand=Plus/Minus Query 22115 GTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTCTTCAGA 22174 || ||||| || || | || | || |||||||| || || || || ||||| || Sbjct 8023 GTGAACTGAATAGCTTGGGCAGAAGGCTTGGTGCGGAGGTAGTAAGCACCGGTCTTGAGT 7964 Query 22175 CCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAGTCCATG 22234 ||| ||||||| |||| || || ||||| || | | | || | | | | Sbjct 7963 CCCCTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGAGAGAATGATGGGTTGGCGAGG 7904 Query 22235 TACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATC 22294 | | |||| |||||| |||||||| |||||||||| |||||||||| | | Sbjct 7903 TGGATGTTGAGCGACTGCGATTGATCGATGTACGCTCCTCGGTCGGCGGCCAAGT----C 7848 Query 22295 AATGTACGCAT----CGACATTTCCCATACGGTCTTGTACAGTTGCCT-GATCTCTAACG 22349 |||| || | ||| || ||||| || |||||||| | | |||| || ||| || Sbjct 7847 AATGACGGCCTTTTGCGAGATCTCCCAGACCGTCTTGTAGA-TAGCCTTGAGCTCGGCCG 7789 Query 22350 GTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTAT 22409 | || ||| |||||| || ||| | ||||| | || || || | | Sbjct 7788 GGATGCCCGGGATGTTCTGGATCGATCCGCCAGCAGCGATGATGAGGTTCTTCATGTTGT 7729 Query 22410 CGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACT 22469 | | ||||| ||||| | | | ||| | || | || || || || || | Sbjct 7728 CATCCCACAGACCGAGATTGATGAGGTCTCGCAGCAACCAAGGGCAAACGACCTGGAAAT 7669 Query 22470 CGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGT 22529 ||||||||| ||| || ||| ||| | |||||||| | || ||||| | || || Sbjct 7668 CGCCGGACAGGACACGACGTGCGTACAGCATGGATGTGTATGGCTCGAAGCACTCGTTCC 7609 Query 22530 TTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCA 22589 |||| || || | |||||| || |||||||| || || | || |||||||| | | Sbjct 7608 AACCCAAGATTTGCGAGGTCGAGGCAGTCGGCATGGGAGCGACAAGAAGCGAGTTGCGAA 7549 Query 22590 AGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGG--CGT 22647 |||||||| | || || ||| | ||||||||| ||||||| ||| || Sbjct 7548 CGCCGTGCTCGGCGATCTTGGCACGAAGCTCAGTCCAGTCCCAGAGATCGGTCGGGACGC 7489 Query 22648 CACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGT 22707 || |||| | || | |||| | ||| || || ||| ||||| | Sbjct 7488 GAC-----CCCAAAGGTCAAACTGCAGCTTGCCCTGAGAGATGGGAGAGCCCTCGTATGA 7434 Query 22708 TTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATAT 22767 || || || | | ||| || ||||| |||||| | |||| | | || || Sbjct 7433 CTCATATCTCCCCTGCTCCTGGGCCAGCTCGCACGACGCCTCGAGCGCGGCATGGTAGAT 7374 Query 22768 AGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCAT 22827 ||||||||||| | |||| | ||| ||||||| ||| | ||||| || | Sbjct 7373 GGTCTCGAAGATCTGGATGTTGAGCTCGCGGGCGGCGGGCGAGTCGAATGGCATGCGAAG 7314 Query 22828 CATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATT 22887 || |||||| || || | ||||||||| || | ||||| |||||||| | | || Sbjct 7313 AGCCATGAACGCATCGGCGAGACCCTGAACACCGAGACCGACCGGTCGGTGTCGGAAGTT 7254 Query 22888 CGACACTTTTGCCTCGGGCAAAGGATACCAATT-CGAATCGATTGTTCTGT-TCAAGTTT 22945 || || || || | ||| || |||| || ||| | || ||||| || Sbjct 7253 GGAGTTGCGAGCTTCAGGAACAGGGTAGTAATTGCG---CGAGATGACGGTGTCAAGGTT 7197 Query 22946 CT-GGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CGAT---T 23000 || ||| || | || || || | |||||||| || | || | | Sbjct 7196 CTTGGTAACGACCTTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGACTCGGCGCTCCAT 7137 Query 23001 GTACAACAAACTTGTTGAC--GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTT 23058 || | || || || || | ||||| |||||| || ||||| ||||| || || || Sbjct 7136 GT-CGACGAA--TGCTGGCAGGGCGAGCGAGGCGAGGTTGCAAACGGCGACTTCATCGGG 7080 Query 23059 GGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT 23118 | | |||||| | || || || || || ||| |||| || ||||| | | ||| Sbjct 7079 AGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGACGACTTGATTGTGCCGAGGT-GCT 7021 Query 23119 -CTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 ||||||| || || ||| | |||||||| |||||| | || || |||||| Sbjct 7020 GCTGGTTGGACTTGCGGTTGGCGGCGTCCTTGTACAGCATGAAAGGTCCACCGGTCTCGG 6961 Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-G 23236 ||| | ||||| ||| || ||| | ||||||| | | ||| || ||| | Sbjct 6960 TCTGGGCCTCGAGGATGGCGAACCAGAGCTTCTGAGCCTTGATG-GTCTTGCGACCCTTG 6902 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296 || | | |||||| | ||| | | || || || | || ||||| |||||| Sbjct 6901 CCGGCCTTCTCGTAGCCCTCGTAGAGCTTCTCGAAGTCATCCGAGTGGCAGTCAGCCAGG 6842 Query 23297 CCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATA 23356 ||||| | | || ||||| ||| |||| || || ||||| |||| Sbjct 6841 CCGGGGCACTCGGCGGGGCACATCAGAGTCCAGTCGCCATCGGACTCGACGCGCTTCATG 6782 Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || || || | ||||| || |||||||| || || || ||||| || |||||||| ||| Sbjct 6781 AAGAGGTCGGAGATCCAAAGTGCGTAGAAGAGATCACGAGCGCGGACTTCCTCTTTACCG 6722 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 ||||||| || || | ||||| || | ||| || ||||| ||||||||||| | | Sbjct 6721 TGGTTCTTTCGCAGGTCGAGGAAGTCGAAGATGTCTGCGTGCCAAGGCTCGAGGTAGATG 6662 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || || || || |||| ||| ||||| ||||| || ||||| || || || | ||| Sbjct 6661 GCGAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCCACGTATCGAGCAGTAGCATCGTAA 6602 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCT 23596 | | ||||| || |||| ||||||||| |||| || || | ||| || Sbjct 6601 GCACGGAGCATAGGGACGATACCGTTGGAGTAGCCGTTGGTACCAGCAATGTACGAGCCC 6542 Query 23597 TTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCG 23656 || || || | |||||| | ||| | ||| || || || | | || || ||| ||| Sbjct 6541 TTGGCACGGATGTTGTGGATGTGCAGACCGATACCGCCAGCAGTCTTGGAGATCTGGGCG 6482 Query 23657 CATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAA 23716 || || ||||||||||||||||| || || ||| || | ||||| | ||| Sbjct 6481 CAGGTCTTGAGAGTGTCGTAGATGCCGTCAATCGAGTCATCACGCATGGCGACGAGGAAG 6422 Query 23717 CACGAAGACATTTGCGCTTTGGGCGT 23742 || || ||||| || || ||||| || Sbjct 6421 CAAGACGACATCTGGGCGTTGGGTGT 6396 >seq3392 Length=91092 Score = 178 bits (196), Expect = 1e-39 Identities = 400/591 (68%), Gaps = 14/591 (2%) Strand=Plus/Minus Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | || || || |||||||| || ||| | |||||||||||| Sbjct 44800 GAGAACATCCACTCTGAGACCTACTCACTCCTCATCGACACCTACATCAAGGACAACGAC 44741 Query 57867 GA--GAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCCAAGAAGGCA 57923 | ||| || || ||| | || ||||| || || |||| | ||| |||||||| Sbjct 44740 CGCCGCAAC-TAC-CTCTTCGAGGCCATCGACACCAT-CCCGTGTATCAAGAAGAAGGCC 44684 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCG 57983 |||||| | |||| ||||| | | || |||| ||||||||| | || ||||| Sbjct 44683 GAGTGGGCTCTCAAGTGGATCACGGACACCCGATCCACCTTCGCCGAGCGCCTCATCGCT 44624 Query 57984 TTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAG 58043 ||||| |||||||| || || ||||| || ||| || ||| | || || ||| ||||| Sbjct 44623 TTCGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCGTCCATCTTCTGGCTGAAG 44564 Query 58044 AAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 || |||||||| |||||||| || || || ||||||| | || ||||| ||||||||| Sbjct 44563 AAGCGCGGCCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGT 44504 Query 58104 CTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC--CGACGCGGG 58161 || || || || ||||| ||||| | | | | ||| | | | | | || | Sbjct 44503 CTTCACACCGACTTTGCTTGCCTGCTCTTCACCCACCTCCGCCGCCGCCCTCATCCCGAG 44444 Query 58162 ATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAG 58221 | || || | || ||| |||||| ||| |||||| | ||||| | || || | Sbjct 44443 ACCG--TCGAAAAGATCATCCGCGAGGCCGTCAAGATCGAGCAGGAGTTCCTTACTGACG 44386 Query 58222 CCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTG 58281 |||| || || | | |||| |||||| | | |||| ||||||| ||||| | Sbjct 44385 CCCTGCCCGTCTCGCTCATCGGCATGAACTCGAAACTCATGTGCCAGTACATCGAGTTCG 44326 Query 58282 TTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAATCC 58339 | |||||| | || | ||| || | |||| ||| | ||| | || || Sbjct 44325 TCGCCGACCGCCTGCTCGTCGCTCTCGGCAACGAGAAGGTC--TGGAACGTCAGCAACCC 44268 Query 58340 GTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || || ||| | ||||||| ||| |||||||| | ||||| ||||| Sbjct 44267 CTTCGACTTCATGGAGATGATCTCTCTCCAGGGCAAGGCCAACTTCTTCGA 44217 >seq1820 Length=19797 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| || ||||| |||| || ||| | || Sbjct 366 ATGCAGATCTTCGTGAAAACGCTTACCGGCAAGACCATCACTCTCGAGGTCGAATCATCT 425 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | || || || ||| | ||| || || || | ||||| ||||| Sbjct 426 GACACTATCGACAACGTGAAGGCAAAGA-TCCAGGATAAAGAGGGTATTCCGCCTGACCA 484 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || ||||||||||| |||||||||||| || | ||| || || Sbjct 485 GCAACGTCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGCACCCTCTCCGACTACAA 544 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || ||||| ||||| ||||| || |||||| |||| ||||||||| Sbjct 545 CATCCAGAAAGAGTCGACCCTTCACCTTGTACTTCGACTTCGGGGCGGTA 594 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || ||||| || || || || ||||| |||| |||||| ||||| Sbjct 594 ATGCAGATTTTCGTCAAAACTCTCACCGGGAAGACAATCACTCTCGAAGTTGAATCGTCC 653 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| || || |||||| || ||| | || || || ||| Sbjct 654 GACACAATCGACAACGTAAAAGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGATCAG 713 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA-CTATGAGCGATTATAA 31371 || ||||| || || || || || ||| | || || | | || || || || || || Sbjct 714 CAACGTCTCATCTTTGCCGGGAAGCAGCTTGAGGA-TGGACGAACTCTGTCGGACTACAA 772 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| ||||| ||||||||||| || || || Sbjct 773 CATTCAGAAAGAGTCGACTCTTCACCTCGTCCT 805 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| ||||||||| |||| || || | | Sbjct 138 ATGCAGATCTTCGTGAAGACCCTTACTGGCAAGACGATCACCCTCGAAGTCGAGTCCAGC 197 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | ||||| |||||| Sbjct 198 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 257 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||||||||| || | || ||| || | |||||| ||| Sbjct 258 CAACGTCTCATCTTCGCTGGCAAGCAACTCGAGGACGGCCGTACACTTTCCGATTACAAC 317 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || |||||||| || || || || || || || Sbjct 318 ATCCAAAAAGAGTCCACCCTCCACCTTGTGCT 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445746886575840