Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2769 104 2e-17 >seq2769 Length=42269 Score = 104 bits (114), Expect = 2e-17 Identities = 141/193 (73%), Gaps = 8/193 (4%) Strand=Plus/Plus Query 21168 GGGTTCCACGCGCACATAACGATGCGCCGATC-GTGGGG--CCGCCTGTTAATTAGATCC 21224 ||||||||||||| || ||||| |||| || || ||| | |||| | | | | Sbjct 4515 GGGTTCCACGCGCTCAGCACGATCCGCCTGTCCGTCGGGTTCTCCCTGATCTTGCGCACG 4574 Query 21225 ACCACGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTA 21283 ||| | ||| ||||||||||||||||| ||| | || | | | ||| | || ||| Sbjct 4575 ACCTC----CGCGAGCTGGTCCACCCCCTGGCCCGCATAATCGTCCTCGCACGTCCCGTA 4630 Query 21284 CTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCG 21343 | || |||||||| | |||||| |||||||||||||||||||| ||||||||||| || Sbjct 4631 CGGAGCGCCAAAATGCCGCCACTGAAACCCGTACACCGGCCCCAGGTCGCCCTCGCGCCG 4690 Query 21344 GTCCCCGAAGCCC 21356 | || | |||| Sbjct 4691 ATGACCAAGGCCC 4703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427757742252960