Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3392 87.8 1e-12 >seq3392 Length=91092 Score = 87.8 bits (96), Expect = 1e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 || ||| | || || || || || || ||| || | || || || || || ||| |||| Sbjct 44635 CGCCTCATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCGTCCATC 44576 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||||||||| || |||||||| || | | || ||||||||| | || Sbjct 44575 TTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCG 44516 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 |||||||| ||||| ||| ||||||||||| |||| || Sbjct 44515 CGTGACGAGGGTCTTCACACCGACTTTGCTTGCCTGCTCTT 44475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356218395727306