Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3392 131 2e-25 seq3359 87.8 3e-12 >seq3392 Length=91092 Score = 131 bits (144), Expect = 2e-25 Identities = 180/251 (72%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| ||||||||||| | || || |||||||| || || || Sbjct 44484 CAAGCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGA 44543 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||| ||||| || ||||| || |||||||| || || || || |||||| Sbjct 44544 CCGGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAACGAGCCGGAGAAGAAG 44603 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136 || || || || || || || || | || | ||| | | ||| | |||| Sbjct 44604 ATGCCCTCGACGGCAGCGAAAGCGATGAGGCGCTCGGCGAAGGTGGATCGGGTGTCCGTG 44663 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||||| ||||||| ||||||||||| || | ||| || || || || ||||| | Sbjct 44664 ATCCACTTGAGAGCCCACTCGGCCTTCTTCTTGATACACGGGATGGTGTCGATGGCCTCG 44723 Query 50197 AAGAGATAGTT 50207 ||||| ||||| Sbjct 44724 AAGAGGTAGTT 44734 >seq3359 Length=24196 Score = 87.8 bits (96), Expect = 3e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| |||||||| || ||| ||||| || | || || || || || || || || Sbjct 3839 CAAGCATGCGAAGTCTGTGTGTGTGCCCTCATCGCGGCTGATGAGCTCATTCGAGAAGGT 3898 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| || ||||| || || | ||| || ||||| || |||| || |||||||| ||||| Sbjct 3899 GAGGCCTGGCATAAGACCCCTCTTCTTGAGCCAGAAGATGGCGGCGAATGACCCGGAAAA 3958 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 |||||| || || || |||||| ||||| || Sbjct 3959 GAAGATGCCCTCAACACAGGCAAACGCAACGAG 3991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718237357783280