Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1820 86.0 5e-12 >seq1820 Length=19797 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || ||||| || ||||| ||||| |||| || ||| | ||||| ||||| || || Sbjct 790 GTCGACTCTTTCTGAATGTTGTAGTCCGACAGAGTTCGTCCATCCTCAAGCTGCTTCCCG 731 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| | || || | |||||||| ||| | |||||||||||| || ||| |||| Sbjct 730 GCAAAGATGAGACGTTGCTGATCAGGGGGGATGCCCTCTTTGTCCTGGATCTTCGCTTTT 671 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | ||| || ||| | || ||||| || || || || || || | |||| Sbjct 670 ACGTTGTCGATTGTGTCGGACGATTCAACTTCGAGAGTGATTGTCTTCCCGGTGAGAGTT 611 Query 19025 TTGACAAAAATTTGCAT 19041 ||||| ||||| ||||| Sbjct 610 TTGACGAAAATCTGCAT 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414555105773788