Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1820 95.1 8e-15 >seq1820 Length=19797 Score = 95.1 bits (104), Expect = 8e-15 Identities = 143/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGT-CATCC---AATTGCTT 33228 ||||||||||| || || ||||| || |||| ||||| || ||||| | ||||| Sbjct 790 GTCGACTCTTTCTGAATGTTGTAGTCCGACA----GAGTTCGTCCATCCTCAAGCTGCTT 735 Query 33229 TCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTG 33288 || ||| || | ||||||||| || | ||| ||||| ||||| || ||| | Sbjct 734 CCCGGCAAAGATGAGACGTTGCTGATCAGGGGGGATGCCCTCTTTGTCCTGGATCTTCGC 675 Query 33289 TTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAG 33348 |||||| | | || |||||| | || ||| || ||||| || || || || || || Sbjct 674 TTTTACGTTGTCGATTGTGTCGGACGATTCAACTTCGAGAGTGATTGTCTTCCCGGTGAG 615 Query 33349 AGTTTTTACGAAAATTTGCAT 33369 |||||| |||||||| ||||| Sbjct 614 AGTTTTGACGAAAATCTGCAT 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318763994372796