Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2769 102 6e-17 >seq2769 Length=42269 Score = 102 bits (112), Expect = 6e-17 Identities = 208/303 (69%), Gaps = 6/303 (2%) Strand=Plus/Plus Query 25666 TTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCC 25725 || |||||||| |||| || | ||| | |||||| ||||| |||||||| | | Sbjct 4512 TTCGGGTTCCACGCGCTCAGCACGATCCGCCTGTCCGTCGGGTTCTCCCTGATCT--TGC 4569 Query 25726 GCG-GTGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTG 25782 || | | || ||||| ||||||||| |||| || || || | || |||| | Sbjct 4570 GCACGACCTCCGCGAGCTGGTCCACCCCCTGGCCCGCATAATCGTCCTCGCACGTCCC-G 4628 Query 25783 TACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCC 25842 ||| || || |||| || |||||| |||||||||||||| || ||||| || || | Sbjct 4629 TACGGAGCGCCAAAATGCCGCCACTGAAACCCGTACACCGGCCCCAGGTCGCCCTCGCGC 4688 Query 25843 CTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTT 25902 | || ||| |||| || | | || ||| || ||| | |||||||| || Sbjct 4689 CGATGACCAAGGCCCACGCGGTCGAGGTACTCCCTGCTGCCGTTGCCTTCCCAGATATTC 4748 Query 25903 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 ||||||| | || |||| ||| || ||| |||| || |||||||||||||||||| Sbjct 4749 ACCCCCTGCGCGCTGAGCCGCTTGCCGTCCGTGCACCCGCTCACGAACCACAGCAGCTCC 4808 Query 25963 GCC 25965 || Sbjct 4809 TCC 4811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340123082714646