Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1820 104 2e-17 >seq1820 Length=19797 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| ||| || || | ||||| | | |||||| || || |||||||| ||||| Sbjct 520 TCTTCCAACTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGCGGAATACCCTCTTTA 461 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || |||||||| ||| | ||| |||||||| ||||| || | |||||| Sbjct 460 TCCTGGATCTTTGCCTTCACGTTGTCGATAGTGTCAGATGATTCGACCTCGAGAGTGATG 401 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| |||||||| ||||||||||| Sbjct 400 GTCTTGCCGGTAAGCGTTTTCACGAAGATCTGCAT 366 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855 ||| | ||| | || || || ||||| | ||| |||||| | ||||| | ||| Sbjct 347 CACAAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAATCGG--AAAGTGTACGGCCGTCC 290 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || || || || || | ||||| | | |||||| || || || || || || ||||| Sbjct 289 TCGAGTTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 230 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGG 94973 | || || |||||||| | ||| ||||| || ||| ||||| || | ||||| | Sbjct 229 TGGATCTTGGCCTTGACATTGTCGATGGTGTC-GC-TGGACTCGACTTCGAGGGTGATCG 172 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || |||||||| || ||||| ||||||||||| Sbjct 171 TCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448271576052720