Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1542 343 4e-89 >seq1542 Length=14377 Score = 343 bits (380), Expect = 4e-89 Identities = 1053/1610 (65%), Gaps = 40/1610 (2%) Strand=Plus/Plus Query 363573 CAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGA 363632 ||| ||||| || | || | |||||||| |||||||| || | ||| || || Sbjct 6386 CAACGCTGGCACACCCAACGCCCAGATGTCGTCTTGCTTCCTCGTCGCCATGCGTGATGA 6445 Query 363633 TTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGG 363692 || || || || |||| ||||| || |||| || || | || ||||||| ||| || Sbjct 6446 CTCGATTGACGGCATCTACGACACTCTCAAGACCTGCGCCCAGATCTCCAAGACTGCTGG 6505 Query 363693 CGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGG 363752 ||| || ||| | |||||||| | ||||| || | |||||| || || Sbjct 6506 CGGTATCGGTCTGCACATCCACAACATCCGTGCCAAGGGCTCGTACATTGCTGGTACCAA 6565 Query 363753 GGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGT 363812 || ||||| || || | || || ||||| |||| | || |||||| | ||||| Sbjct 6566 CGGCTACTCCAACGGTATCGTCCCTATGCTCCGTGCTTACGATGCTACTGCTCGATACGT 6625 Query 363813 CGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGC 363872 ||||||||||| ||||| || || || || || || ||||||||| || || Sbjct 6626 GGACCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACGC 6685 Query 363873 CGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACG 363932 || || || || || || || || || || ||| || ||||||||| | || || || Sbjct 6686 AGACATCTTCGACTTCCTCGACCTGCGAAAGAACCACGGTAAAGAGGAAGTCCGCGCTCG 6745 Query 363933 TGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAA 363992 |||||| ||||| ||||||||| | || |||| || ||||||||||| ||| | | | Sbjct 6746 TGATCTCTTCTACGCACTTTGGATCTCCGACCTCTTCATGAAGCGCGTCGAGTCCGATGG 6805 Query 363993 GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG--TATGGGGTGA 364049 | ||| | || | ||||| ||| || || || || | || || | || ||| Sbjct 6806 CGACTGGACTCTGATGTGCCCCGCCGAGTGCCCCGGCCTGGCTGACTGCCACTCGGATGA 6865 Query 364050 CGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCC 364109 | | | | |||| ||||| || || || || |||| ||| ||||| || Sbjct 6866 CTTCGA-GAAGCTC--TACGAGGGCTACGAGAAGGCCGGCAAGGGTCGCAAGACCATCAA 6922 Query 364110 CGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATAT 364169 || |||||||| ||||| |||||| | || | |||| ||||| || ||| | || Sbjct 6923 GGCTCAGAAGCTCTGGTTCGCCATCCTCGAGGCCCAGACCGAGACCGGTGGACCTTTCAT 6982 Query 364170 GTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCA 364229 | ||||||| || | ||||||||||||||||||||||||||| || ||||| || Sbjct 6983 GCTGTACAAGGACGCCGCCAACCGCAAGTCCAACCAGCAGCACCTCGGCACAATCAAGTC 7042 Query 364230 GAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289 | |||||| || || ||||| || || ||| | |||||||| || ||||| || || Sbjct 7043 GTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCTCCCGATGAAGTCGCCGTTTGCAA 7102 Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTAC-------TTTTGACCACC 364342 ||| || ||| |||| || || || || || | |||| | | ||| | Sbjct 7103 CCTCGCCTCGCTCGCCCTGCCAGCATTCGT-CGACATGGAGCGCCGAGTCTACGACTTCA 7161 Query 364343 AGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGA 364402 || | || | || | ||| | | ||| || || |||| || ||| | Sbjct 7162 AGAAGCTGCACGAGATCACCAAGGTCGTTACCAAGAACCTTGACACCGTCATCTCGCGCA 7221 Query 364403 ATTATTATCCAATTCCTGAAGC-CG-AGCGTTCTAATATGCGTCATCGCCCGATTGGTCT 364460 |||| || || |||||||||| || | | || || | || || || ||| | ||||| Sbjct 7222 ATTACTACCCTGTTCCTGAAGCTCGCAAC--TCCAACTTCCGACACCGACCGGTCGGTCT 7279 Query 364461 TGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGA 364520 ||||| ||||| ||||| || | || ||| || ||| |||| || ||||| | Sbjct 7280 CGGTGTTCAGGGTCTCGCCGATGCGTTCATGGCTCTTCGCATGCCATTCGACTCGCCCGC 7339 Query 364521 CGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTC 364580 ||| || | || || | ||||||| || || || || |||||| | || || Sbjct 7340 CGCCCGCGAGCTCAACATCCAGATCTTCGAGACCATCTACCATGCCGCGCTCGAGGCGTC 7399 Query 364581 GTGTGATTTGG-CAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGC 364639 ||| || ||| | | | || |||| | || | || ||||| || || | || | Sbjct 7400 GTGCGAGCTGGCCCAGGAGCAGGGGAGA-TATGAGTCATACGAGGGCTCTCCCATCTCTC 7458 Query 364640 AGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA----TGGAACTGG 364695 |||| || | |||||||| || ||| ||| || | | | |||| ||| ||||| Sbjct 7459 AGGGCAAGCTGCAGTTTGACCTTTGG--GGTCGCGTC--CCGACCGATCTCTGGGACTGG 7514 Query 364696 GATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCC 364755 | ||| ||| |||| | |||| || ||||||||| || || || ||| Sbjct 7515 ACTGAGCTTCGTGCCAAGATCGCCGAGCACGGCGTTCGCAACTCGCTTCTTGTCGCTCCC 7574 Query 364756 ATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACA 364815 ||||| || || || || | || ||| | || |||||||||||||| || | ||| Sbjct 7575 ATGCCGACTGCCTCGACCTCGCAAATCTTGGGTTGGAACGAGTGCTTCGAGCCATACACA 7634 Query 364816 AGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTT---AATAAGTAC 364872 || || || |||| || || || ||||| || || | ||| ||| | || Sbjct 7635 TCCATGCTGTACGCACGTCGTGTCCTGTCCGGCGATTTCCAGGTCGTTTGCCCTTGGTTG 7694 Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932 || | | || || | | | ||| ||||||| ||||| |||||||||| |||||| Sbjct 7695 CT-GCGA--GACCTCATCAATCTCGGTCTGTGGGATGACAACATGAAGAACCTCATCATC 7751 Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTAC 364992 || ||| || || | |||||||| || || | || | || || ||| |||| ||| Sbjct 7752 GCTGCTGGCGGATCGATCCAGAACATCCCGGGCATCCCGGCCGAGCTCAAGGCTATCTAC 7811 Query 364993 AAAACCGTATGGGAAATTTCCATGCGAA---CTCTCATTGATATGGCGGCCGATCGCGGT 365049 || || || ||||| || || || || | ||||||| |||| ||||| || || Sbjct 7812 AAGACGGTCTGGGAGATCTC---GCAAAAGGCCGTCATTGACTTGGCCGCCGACCGAGGA 7868 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109 || | ||| ||| |||||| | ||| | | | | | ||| | | | | || Sbjct 7869 GCGTACATCGATCAATCGCAGTCGCTCAACATCCACCTCGCCAACCCATCATTCTCTCAG 7928 Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGTGC 365159 || || || ||||| |||||||| ||||| || || ||||| ||||| Sbjct 7929 CTCACCTCGATGCACTTCTACGGCTGGAAGAGGGGACTCAAGACCGGTGC 7978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303295119338564