Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1820 100 2e-16 >seq1820 Length=19797 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | ||||| || ||||||| |||| || || || ||| Sbjct 366 ATGCAGATCTTCGTGAAAACGCTTACCGGCAAGACCATCACTCTCGAGGTCGAATCATCT 425 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| ||| ||| || ||||| || ||||| |||||||| Sbjct 426 GACACTATCGACAACGTGAAGGCAAAGATCCAGGATAAAGAGGGTATTCCGCCTGACCAG 485 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || || ||||| || || ||||| | ||||| | ||| ||||| Sbjct 486 CAACGTCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGCACCCTCTCCGACTACAAC 545 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || ||||| || || || || Sbjct 546 ATCCAGAAAGAGTCGACCCTTCA 568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433309505290130