Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3392 96.9 4e-15 >seq3392 Length=91092 Score = 96.9 bits (106), Expect = 4e-15 Identities = 215/321 (67%), Gaps = 4/321 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 44483 GCAAGCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAG 44542 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||| ||||| || || || || || || || || || Sbjct 44543 ACCGGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAACGAGCCGGAGAAGAA 44602 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG--CGGAATTACTG 93268 || || || ||||| || || || | | || ||||| || | | ||| | | Sbjct 44603 GATGCCCTCGACGGCAGCGAAAGCGATGAGGCGCTCGGCGAAGGTGGATCGGGTGTCC-- 44660 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 ||||||| || | |||||| ||||| || ||||| ||||| || | || ||||| || Sbjct 44661 GTGATCCACTTGAGAGCCCACTCGGCCTTCTTCTTGATACACGGGATGGTGTCGATGGCC 44720 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 | || ||||| | || ||| || ||||| || ||||| | || || || Sbjct 44721 TCGAAGAGGTAGTTGCGGCGGTCGTTGTCCTTGATGTAGGTGTCGATGAGGAGTGAGTAG 44780 Query 93389 ATTTCAGAATGGACATTCTCC 93409 | ||||| |||| |||||| Sbjct 44781 GTCTCAGAGTGGATGTTCTCC 44801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556836423418480