Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1542 381 1e-100 seq3392 266 6e-66 seq3359 109 1e-18 >seq1542 Length=14377 Score = 381 bits (422), Expect = 1e-100 Identities = 1091/1665 (66%), Gaps = 63/1665 (4%) Strand=Plus/Minus Query 243766 CTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCAT 243825 |||||| | |||||||| |||||||||||||| || |||| ||| || |||||| Sbjct 7997 CTTGGTGCGGAGGTAGTAAGCACCGGTCTTGAGTCCCCTCTTCCAGCCGTAGAAGTGCAT 7938 Query 243826 GGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGA 243885 | || |||| | ||| ||||| | | || || |||||| || Sbjct 7937 CGAGGTGAGCTGAGAGAA--TGA----TGGGTTGGCG------AGGTGGATGTTGAGCGA 7890 Query 243886 CTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGA 243945 ||| || |||| | | | | || || ||||||| | |||| | |||| || || Sbjct 7889 CTGCGATTGATCGATGTACGCTCCTCGGTCGGCGGCCAAGTCAATGACGGCCTTTTGCGA 7830 Query 243946 TATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTG 244005 ||||| | ||||||||||||| | |||||| | | |||| || ||||||||| Sbjct 7829 GATCTCCCAGACCGTCTTGTAGATAGCCTTGAGCTCGGCCGGGATGCCCGGGATGTTCTG 7770 Query 244006 CACCGAGCC-CTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCA-AG 244063 | ||| || | | | |||||| || | |||||| || | |||||| || | | Sbjct 7769 GATCGATCCGCCAGCAG-CGATGATGAGGTTCTTCATGTTGTCATCCCACAGACCGAGAT 7711 Query 244064 CGCTCCAG---CGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACG 244120 | | | ||| | |||| | || || ||||| || || || ||||| || Sbjct 7710 TGATGAGGTCTCGCAGCAACCAAGGGCAA----ACGACCTGGAAATCGCCGGACAGGACA 7655 Query 244121 CGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGC 244180 || || ||| || || || ||||||| || ||| | |||| || ||| Sbjct 7654 CGACGTGCGTACAGCATGGATGTGTATGGCTCGAAGCACTCGTTCCAACCCAAGATTTGC 7595 Query 244181 GCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTG- 244239 | || |||||||||||||| | || || || ||| | ||||||||| || | Sbjct 7594 GAGGTCGAGGCAGTCGGCATGGGAGCGACAAGAAGCGAGTTGCGAACGCCGTGC-TCGGC 7536 Query 244240 GATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCC 244299 ||| | | ||||| |||||||||| | || |||| || | || Sbjct 7535 GATCTTGGCACGAAGCTCAGTCCAGTCCCAGA-----GATCGGTCGGGACGC----GACC 7485 Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359 ||| | ||||||||||||| |||| || ||| ||||||||| | | || Sbjct 7484 CCAAAGGTCAAACTGCAGCTTGCCCTGAGAGATGGGAGAGCCCTCGTATGACTCATATCT 7425 Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAA 244419 || | ||||||||||| || | | ||||| ||||| | ||||||||||||||| Sbjct 7424 CCCCTGCTCCTGGGCCAGCTCGCACGACGCCTCGAGCGCGGCATGGTAGATGGTCTCGAA 7365 Query 244420 GATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAA 244479 |||| |||| | |||||||| | || ||| || |||| | |||||| Sbjct 7364 GATCTGGATGTTGAGCTCGCGGGCGGCGGGCGAGTCGAATGGCATGCGAAGAGCCATGAA 7305 Query 244480 GACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCAT 244539 | ||||| || ||||| || |||| |||| |||| |||||| ||||||| Sbjct 7304 CGCATCGGCGAGACCCTGAACACCGAGACCGACCGGTCGGTGTCGGAAGTTGGAGTTGCG 7245 Query 244540 GGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCAT 244599 ||||| || || ||||| | |||| ||| || ||| ||||| ||| | | Sbjct 7244 AGCTTCAGGAACAGGGTAGTAATTGCGCGAGATGACGGTGTCAAGGTTCTTGGTAACGAC 7185 Query 244600 GCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA--CTCGTAGGGATCCTCGGCGATGGTG 244657 | || ||| |||| || |||||||| |||| | | ||| | ||| | Sbjct 7184 CTTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGACTCG--GCGCTCCATGTCGACGA-- 7129 Query 244658 ATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAG 244717 || || || |||||| ||| |||||||| ||||| || || || | Sbjct 7128 ATGCTGGCA----------GGGCGAGCGAGGCGAGGTTGCAAACGGCGACTTCATCGGGA 7079 Query 244718 TTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGG 244777 | ||||| || ||||| ||||||||||| ||||||| ||||| |||||||| Sbjct 7078 GCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGACGACTTGATTGTGCCGAGGTGCTGC 7019 Query 244778 TGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGC 244837 || ||||||||| |||| |||||||||||| |||||||| || || ||||||||| | Sbjct 7018 TGGTTGGACTTGCGGTTGGCGGCGTCCTTGTACAGCATGAAAGGTCCACCGGTCTCGGTC 6959 Query 244838 TGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCC 244897 ||||| |||||| | | |||||| | | |||||||| ||| ||||| ||||||| Sbjct 6958 TGGGCCTCGAGGATGGCGAACCAGAGCTTCTGAGCCTTGATGGTCTTGCGACCCTTGCCG 6899 Query 244898 TCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA---CTCGGGGCCCCAGACCTCGTCTAGG 244954 | |||||||| ||| || |||||| || | | ||| || | ||| Sbjct 6898 GCCTTCTCGTAGCCCTCGTAGAGCTTCTCGAAGTCATCCGAGTGGCAG---TCAGCCAGG 6842 Query 244955 CCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATG 245014 ||||||||| || |||||||| ||| |||| ||||| || || ||| | || |||| Sbjct 6841 CCGGGGCACTCGGCGGGGCACATCAGAGTCCAGTCGCCATCGGACTCGACGCGCTTCATG 6782 Query 245015 AAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCA 245074 |||||||||| |||||| || || | |||||| || | | | || || || Sbjct 6781 AAGAGGTCGGAGATCCAAAGTGCGTAGAAGAGATCACGAGCGCGGACTTCCTCTTTACCG 6722 Query 245075 GTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACA 245134 |||||| | ||| || | ||||| |||| ||| ||||||| ||||| | ||||| Sbjct 6721 TGGTTCTTTCGCAGGTCGAGGAAGTCGAAGATGTCTGCGTGCCAAGGCTCGAGGTAGATG 6662 Query 245135 GCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTT 245190 |||| || ||||| ||||||||||| |||||||||| | | |||||| || | Sbjct 6661 GCGAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCCA----CGTATCGAGCAGTAGCATC 6606 Query 245191 GAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGC 245250 | | || || |||| || || ||||| |||| ||||||||| || ||||| | Sbjct 6605 GTAAGCACGGAGCATAGGGACGATACCGTTGGAGTAGCCGTTGGTACCAGCAATGTACGA 6546 Query 245251 GCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAG 245310 ||||||| | | || |||| |||| || || | ||||| || ||||||||| | Sbjct 6545 GCCCTTGGCACGGATGTTGTGGATGTGCAGACCGATACCGCCAGCAGTCTTGGAGATCTG 6486 Query 245311 GGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAG 245370 ||||||| |||||| ||||| ||||| || || ||| |||| || || Sbjct 6485 GGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTCAATCGAGTCATCACGCATGGCGACGAG 6426 Query 245371 AAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAG 245415 ||||| || |||| ||||| ||||| ||| | |||||| || Sbjct 6425 GAAGCAAGACGACATCTGGGCGTTGGGTGTGCCAGCGTTGAAGAG 6381 >seq3392 Length=91092 Score = 266 bits (294), Expect = 6e-66 Identities = 432/609 (71%), Gaps = 27/609 (4%) Strand=Plus/Minus Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593 |||||| | ||||||||| ||| | ||| |||| |||| |||||| ||| | Sbjct 44800 GAGAACATCCACTCTGAGACCTACTC---ACTCCTCATCGACACCTACATCAAGGACAAC 44744 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653 | | || ||| || ||| ||||||| || || || || || |||||||||||||| Sbjct 44743 GACCGCCGCAACTACCTCTTCGAGGCCATCGACACCATCCCGTGTATCAAGAAGAAGGCC 44684 Query 42654 GACTGGGCGCTCAACTGGATCGAG-AGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 || ||||| ||||| |||||| | | ||||| || | |||| |||| | || | || Sbjct 44683 GAGTGGGCTCTCAAGTGGATCACGGACACCCGATCCACC-TTCGCCGAGCGCCTCATCGC 44625 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 || | ||||||||||||||||||||||| ||| | ||||| |||||||||||||| || Sbjct 44624 TTTCGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCGTCCATCTTCTGGCTGAA 44565 Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || || || |||||||| || |||||||| ||||| |||||| | ||||||| Sbjct 44564 GAAGCGCGGCCTC-ATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAGG 44506 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC-G 42890 | || || | |||||||| ||||| || ||| | ||||||| | | | |||||| Sbjct 44505 GTCTTCACACCGACTTTGCTTGCCTGCTCTTC---ACCCACCTCCGCCGC-CGCCCTCAT 44450 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||| ||| |||||| |||||||| |||||||| |||||||||| || Sbjct 44449 CCCGAGACCGTCGAAAAGATCATCCGCGAGGCCGTCAAGATCGAGCAGGAGTTCCTTACT 44390 Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAG 43010 | | |||||||| || || ||||||||||| | ||||||||| |||||||| || Sbjct 44389 GACGCCCTGCCCGTCTCGCTCATCGGCATGAACTCGAAACTCATGTGCCAGTACATCGAG 44330 Query 43011 TACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACACG 43064 | |||||||||| | |||| | | | |||| || || ||| ||| Sbjct 44329 TTCGTCGCCGAC---CGCCTG---CTCGTCGCTCTCGGCAACGAGAAGGTCTGGAACGTC 44276 Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124 |||||||||||| ||||||| ||||| | |||||||| ||||||| |||||| Sbjct 44275 AGCAACCCCTTCGACTTCATGGAGATGATCTCTCTCCAGGGCAAGGCCAACTTCTTCGAG 44216 Query 43125 AAGCGCGTC 43133 |||||| Sbjct 44215 TCCCGCGTC 44207 >seq3359 Length=24196 Score = 109 bits (120), Expect = 1e-18 Identities = 103/129 (80%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || || ||| || || |||||||||||||| || || | |||||| |||||||| Sbjct 3991 CTCGTTGCGTTTGCCTGTGTTGAGGGCATCTTCTTTTCCGGGTCATTCGCCGCCATCTTC 3932 Query 42765 TGGCTCAAGCAGAAGGTGTCG-ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823 ||||||||| ||| || ||| ||||| || |||||||||||||| || ||||||||| | Sbjct 3931 TGGCTCAAGAAGAGGG-GTCTTATGCCAGGCCTCACCTTCTCGAATGAGCTCATCAGCCG 3873 Query 42824 GGACGAGGG 42832 || ||||| Sbjct 3872 CGATGAGGG 3864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944297861551520