Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1542 212 6e-50 >seq1542 Length=14377 Score = 212 bits (234), Expect = 6e-50 Identities = 513/766 (67%), Gaps = 13/766 (2%) Strand=Plus/Plus Query 93904 CTGTTCAACGCGGGGAC-CCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAA 93962 || |||||||| || || ||| ||| |||||||| || || ||||| | | | Sbjct 6381 CTCTTCAACGCTGGCACACCCAACGCC-CAGATGTCGTCTTGCTTCCTCGTCGCCATGCG 6439 Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022 | ||||| || ||| || | ||||| |||||| ||| || ||||| || Sbjct 6440 TGATGACTCGATTGACGGCATCTACGACACTCTCAAGACCTGCGCCCAGATCTCCAAGAC 6499 Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082 || || || ||||| | ||||| || | ||||||| ||| || ||||| || Sbjct 6500 TGCTGGCGGTATCGGTCTGCACATCCACAACATCCGTGCCAAGGGCTCGTACATTGCTGG 6559 Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG---CGGC 94139 |||||| ||| ||||||||| |||||||||||||||| | ||| || | | | || Sbjct 6560 TACCAACGGCTACTCCAACGGTATCGTCCCTATGCTCCGTG-CTT--ACGATGCTACTGC 6616 Query 94140 GCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCC 94199 || ||||||||||||||||| | | | ||| ||||||| |||| |||||||| Sbjct 6617 TCGATACGTGGACCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCC 6676 Query 94200 CTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGA 94259 |||||||| ||| | | ||| |||||||||||||||||||||| || || | Sbjct 6677 TTGGCACGCAGACATCTTCGACTTCCTCGACCTGCGAAAGAACCACGGTAAAGAGGAAGT 6736 Query 94260 GAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGA 94319 | || | || ||||||||||| || ||| | | ||||| || ||||| |||||||| Sbjct 6737 CCGCGCTCGTGATCTCTTCTACGCACTTTGGATCTCCGACCTCTTCATGAAGCGCGTCGA 6796 Query 94320 GAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-GTTT 94378 | | || ||||| ||| | || ||| || || ||||| ||| | ||| | Sbjct 6797 GTCCGATGGCGACTGGACTCTGATGTGCCCCGCCGAGTGCCCCGGCCTGGCTGACTGCCA 6856 Query 94379 GT-GGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAG 94437 | |||| | || || | | || | | ||||| | ||||||| | ||| Sbjct 6857 CTCGGATGAC--TTCGAGAAGCTCTACGAGGGCTACGAGAAGGCCGGCAAGGGTCGCAAG 6914 Query 94438 GTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACG 94497 || | ||| |||||| ||| ||| | || | ||| ||||| ||| Sbjct 6915 ACCATCAAGGCTCAGAAGCTCTGGTTCGCCATCCTCGAGGCCCAGACCGAGACCGGTGGA 6974 Query 94498 CCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 || | ||| ||| ||||||| | | |||| |||||||||||||||||||||||| Sbjct 6975 CCTTTCATGCTGTACAAGGACGCCGCCAACCGCAAGTCCAACCAGCAGCACCTCGGCACA 7034 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 |||||| || || || ||||| ||||| ||||||| || |||| || || | || Sbjct 7035 ATCAAGTCGTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCTCCCGATGAAGTCGCC 7094 Query 94618 GTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATG 94663 || || ||||| | ||| || |||| | | ||||| ||| ||| Sbjct 7095 GTTTGCAACCTCGCCTCGCTCGCCCTGCCAGCATTCGT-CGACATG 7139 Score = 100 bits (110), Expect = 3e-16 Identities = 193/282 (68%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| |||| ||||| || |||||||| || ||||| || |||| ||| | || ||| Sbjct 7554 AACTCGCTTCTTGTCGCTCCCATGCCGACTGCCTCGACCTCGCAAATCTTGGGTTGGAAC 7613 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| || | ||| |||| ||||| | || || || |||| || ||| Sbjct 7614 GAGTGCTTCGAGCCATACACATCCATGCTGTACGCACGTCGTGTCCTGTCCGGCGATTTC 7673 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAG 95268 | ||| | | | || || ||||| | ||| ||| |||||| |||||| Sbjct 7674 CAGGTCGTTTGCCCTTGGTTGCTGCGAGACCTCATCAATCTCGGTCTGTGGGATGACAAC 7733 Query 95269 GTCAAGAACCAACTGCTACGC-GCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGA 95327 | ||||||| | | ||| || ||| || |||||||||||||| || |||| Sbjct 7734 ATGAAGAACCTCATCAT-CGCTGCTGGCGGATCGATCCAGAACATCCCGGGCATCCCGGC 7792 Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCA 95369 || ||||||| |||||||||| || ||||||||| |||| Sbjct 7793 CGAGCTCAAGGCTATCTACAAGACGGTCTGGGAGATCTCGCA 7834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494701543491920