Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1542 178 2e-39 seq3392 152 6e-32 seq3359 111 2e-19 >seq1542 Length=14377 Score = 178 bits (196), Expect = 2e-39 Identities = 1055/1673 (63%), Gaps = 51/1673 (3%) Strand=Plus/Minus Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578 |||| | |||||||||| | | || | ||| | ||||||||||| || ||| Sbjct 8029 TCAATGGTGAACTGAATAGCTTGGGCAGAAGGCTTGGTGCGGAGGTAGTAAGCACCGGTC 7970 Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638 ||||| ||| ||||||| | || | ||||| |||| | || |||| || ||| | Sbjct 7969 TTGAGTCCCCTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGAGAGAATGATGGGTTG 7910 Query 115639 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 115698 | | | || ||| | || |||||||||||| | ||| || || || |||| Sbjct 7909 GCGAGGTGGATGTTGAGCGACTGCGATTGATCGATGTACGCTCCTCGGTCGGCGGCCAAG 7850 Query 115699 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 115758 ||||| || |||| | ||| ||||| || || |||||| ||| | || | Sbjct 7849 TCAATGACGGCCTTTTGCGAGATCTCCCAGACCGTCTTGTAGATAGCCTTGAGCTCGGCC 7790 Query 115759 GGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCC 115818 ||||| || ||| || ||||| || || || || || ||||| | |||||| | Sbjct 7789 GGGATGCCCGGGATGTTCTGGATCGATCCGCCAGCAGCGATGATGAGGTTCTTCATGTTG 7730 Query 115819 TTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACA--- 115875 | ||| ||||| | || |||| || || | | | | ||| || Sbjct 7729 TCATCCCACAGACCGAGATTGATGAGGTCTCGCAGCAA---CCAAGGGCAAACGACCTGG 7673 Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 || || || | ||| || | || | ||| ||||||||||| |||||||| Sbjct 7672 AAATCGCCGGACAGGACACGACGTGCGTACAGCATGGATGTGTATGGCTCGAAGCACTCG 7613 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 || |||||||||||| | || ||||| || |||||||| || | ||||| |||| Sbjct 7612 TTCCAACCCAAGATTTGCGAGGTCGAGGCAGTCGGCATGGGAGCGACAAGAAGCGAGTTG 7553 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTC--GTAGTTGAGCTTTG 116053 || | || | | ||| || | | | | ||||| || ||| | | Sbjct 7552 CGAACGCCGTGCTCG-----GCGATCTTGGCACGAAGCTCAGTCCAGTCCCAGAGATCGG 7498 Query 116054 TCT---CCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 116110 || | | |||| | |||||||| || | || || || || || ||||| Sbjct 7497 TCGGGACGCGACCCCAAAGGTCAAACTGCAGCTTGCCCTGAGAGATGGGAGAGCCCTCGT 7438 Query 116111 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 116170 ||| ||||||| |||| ||| |||| ||| | ||||||||| || || || | Sbjct 7437 ATGACTCATATCTCCCCTGCTCCTGGGCCAGCTCGCACGACGCCTCGAGCGCGGCATGGT 7378 Query 116171 ACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGAC 116230 | || ||||| || || | || | | ||| || || || || | | | Sbjct 7377 AGATGGTCTCGAAGATCTGGATGTTGAGCTCGCGGGCGGCGGGCGAGTCGAATGGCATGC 7318 Query 116231 GGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 116290 | || || |||| |||||||| || |||||||| || | || || |||| | Sbjct 7317 GAAGAGCCATGAACGCATCGGCGAGACCCTGAACACCGAGACCGACCGGTCGGTGTCGGA 7258 Query 116291 TATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 116350 || || || ||||| || || || |||| | ||| || | | || | Sbjct 7257 AGTTGGAGTTGCGAGCTTCAGGAACAGGGTAGTAATTGCGCGAGATGACGGTGTCAAGGT 7198 Query 116351 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCT 116409 | ||||| || ||||| ||||| || || ||||| | | | || | ||| | | ||| Sbjct 7197 TCTTGGTAACGACCTTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGACTCGGCG-CTCC 7139 Query 116410 TCATTGAC--ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 116467 | ||| || || || ||||||| || || || || || || | | ||||| Sbjct 7138 ATGTCGACGAATGCT--GGCAGGGCGAGCGAGGCGAGGTTGCAAACGGCGACTTCATCGG 7081 Query 116468 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 116527 | ||| |||||| || || || || || | || || ||| || ||||| | || || Sbjct 7080 GAGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGACGACTTGATTGTGCCGAGGTGCT 7021 Query 116528 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCG 116587 || || ||||| ||| || |||||||| ||||| | || || ||||| | Sbjct 7020 GCTGGTTGGACTTGCGGTTGGCGGCGTCCTTGTACAGCATGAAAGGTCCACCGGTCTCGG 6961 Query 116588 TTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC 116646 | |||| || ||| || || ||| | | || | | || | ||| ||| || Sbjct 6960 TCTGGGCCTCGAGGATGGCGAACCAGAGCTTCTGAGCCTTGA----TGGTCTTG---CGA 6908 Query 116647 CCCT------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCT 116700 |||| ||| |||||| |||||| ||| || || || | | | | | Sbjct 6907 CCCTTGCCGGCCTTCTCGTAGCCCTCGTAGAGCTTCTCGAAGTCATC--CGAGTGGCAGT 6850 Query 116701 GAG--AGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCC 116758 || || || || || | || || | |||| ||| | ||| | ||| || | Sbjct 6849 CAGCCAGGCCGGGGCACTCGGCGGGGCACATCAGAGTCCAGTCGCCATCGGACTCGACGC 6790 Query 116759 GCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTT 116818 |||||||||||||||| | |||||| || || |||||||||| ||| ||| |||| | Sbjct 6789 GCTTCATGAAGAGGTCGGAGATCCAAAGTGCGTAGAAGAGATCACGAGCGCGGACTTCCT 6730 Query 116819 CATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCA 116878 | | || || || |||| || | ||||| | ||| || |||||||| || || | Sbjct 6729 CTTTACCGTGGTTCTTTCGCAGGTCGAGGAAGTCGAAGATGTCTGCGTGCCAAGGCTCGA 6670 Query 116879 GGTACACCGCGATTGACCCC--TTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTT 116934 |||| | |||| | || | || | | ||| |||||| || || | || || Sbjct 6669 GGTAGATGGCGAAAGCACCGGGTCGCTTGTTG-CCACCCTGGTCCACGTATCGAGCAGTA 6611 Query 116935 GCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT- 116993 || | | | || ||||| || | |||||| | || | ||| || || || ||| Sbjct 6610 GCATCGTAAGCACGGAGCATAGGGACGATACCGTTGGAGTAGCCGTTGGTACCAGCAATG 6551 Query 116994 -ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTG 117052 ||||| | | |||| | || | ||||||||||| ||| ||||| || || ||| | Sbjct 6550 TACGAGCCCT--TGGCACGGATGTTGTGGATGTGCAGACCGATACCGCCAGCAGTCTTGG 6493 Query 117053 AGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTG 117112 |||| || ||||| | ||||| || ||||||| || || ||||||||| | | | Sbjct 6492 AGATCTGGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTCAATCGAGTCATCACGCATGG 6433 Query 117113 CGATGAGGAAGCAGCTCGACATTTGTGGCCTTGG-TGTACCAGCGTTGAAGAG 117164 ||| ||||||||| |||||| || ||| |||| ||| |||||||||||||| Sbjct 6432 CGACGAGGAAGCAAGACGACATCTG-GGCGTTGGGTGTGCCAGCGTTGAAGAG 6381 >seq3392 Length=91092 Score = 152 bits (168), Expect = 6e-32 Identities = 182/246 (74%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| |||||||||||||| |||||||| || || |||||| ||||| Sbjct 44486 AGCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACC 44545 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 |||||||| || |||||||||| |||||| || | || ||||| ||||||||||| Sbjct 44546 GGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAACGAGCCGGAGAAGAAGAT 44605 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA---GGAGCGGGACTTTGTATC 127695 ||||| || ||||| || | || |||||||| || ||| |||| | || Sbjct 44606 GCCCTCGACGGCAGCGAAAGCGATGAGGCGCTCGGCGAAGGTGGATCGGGTGTCCGT--- 44662 Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTC 127755 | |||||| | ||||||| ||||| |||| |||||| |||| ||| | ||| || || Sbjct 44663 GATCCACTTGAGAGCCCACTCGGCCTTCTTCTTGATACACGGGATGGTGTCGATGGCCTC 44722 Query 127756 AAAGAG 127761 ||||| Sbjct 44723 GAAGAG 44728 >seq3359 Length=24196 Score = 111 bits (122), Expect = 2e-19 Identities = 288/428 (67%), Gaps = 12/428 (3%) Strand=Plus/Plus Query 127240 GACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATT--CTCCATAAAATCA 127297 ||| ||| |||||||||||||| ||| || | |||| ||||| |||||| |||| Sbjct 3566 GACGCGCGACTCGAAGAAGTTTGCCTTGCCTTGGAGG--GATATGAGCTCCATCCAATCG 3623 Query 127298 AATGGGTTCTTTGAGTTCCAAATTGTTGG-CACCCCAATCTGTTTGAGGAGACGATCCGA 127356 || || || | | ||| | ||| | || || |||| | | || | ||||||| Sbjct 3624 AAAGGATTTGTCGTGTTGTATATTTTGGGGCATCCCAG-CGACTCGACCAAGCGATCCGC 3682 Query 127357 GACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAG 127416 || |||| ||||| | ||||| | || ||| || || ||||| | || || | Sbjct 3683 AACAAACTCGATGTATTGCGACATGAGATGAGCGTTTATGCCAATGAGCTGGCAAGGCAA 3742 Query 127417 CGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTGAATAGT 127476 ||||| | | |||| ||||||| || | || || || |||||| ||| | Sbjct 3743 AGCGTCGATCAGGAACTCCTTCTCGATTGCGACCGCCTCGGAAACGATGTGGTGTACGTC 3802 Query 127477 GTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCA-CA-GCAAACTCTTGGTG 127533 || || | | || || | | || | | |||| | | || || || ||| ||| Sbjct 3803 ATCGACTGAACAGCGAT-GCTTGAGGTGATCGTAGAG--CAAGCATGCGAAGTCTGTGTG 3859 Query 127534 GAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCG 127593 ||||| || ||| |||||| |||||||||||| || |||||||| ||||||| Sbjct 3860 TGTGCCCTCATCGCGGCTGATGAGCTCATTCGAGAAGGTGAGGCCTGGCATAAGACCCCT 3919 Query 127594 CTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGC 127653 |||||| | |||||| || || ||||| || || |||||||| ||||| ||||| || Sbjct 3920 CTTCTTGAGCCAGAAGATGGCGGCGAATGACCCGGAAAAGAAGATGCCCTCAACACAGGC 3979 Query 127654 GAACGCAA 127661 ||||||| Sbjct 3980 AAACGCAA 3987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613480343722320