Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1542 140 5e-28 >seq1542 Length=14377 Score = 140 bits (154), Expect = 5e-28 Identities = 430/655 (66%), Gaps = 20/655 (3%) Strand=Plus/Minus Query 204929 TGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTC 204988 ||||||||||| ||||||||||| || ||||||||||| |||||| || ||| || Sbjct 7024 TGCTGCTGGTTGGACTTGCGGTTGGCGGCGTCCTTGTACAGCATGAAAGGTCCACCGGTC 6965 Query 204989 TCCATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCA 205043 || |||| | ||| || ||| | ||| | | |||||| | ||||| | Sbjct 6964 TCGGTCTGGGCCTCG-AGGATGGCGAACCAGAGCTTCTGAGCCTTGATGGTCTTGCGACC 6906 Query 205044 CGTACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGT 205103 | | | |||| |||||| ||| ||| | | |||||| || || Sbjct 6905 CTTGCCGGCCTT----CTCGTAGCCCTCGTAGAGCTTCTCGAAGTCATCCGAGTGGCAGT 6850 Query 205104 CCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCC 205163 | ||| || || || | ||| |||||||||| ||| |||| | || | Sbjct 6849 CAGCCAGGCCGGGGCACTCGGCGGGGCACATCAGAGTCCAGTCGCCATCGGACTCGACGC 6790 Query 205164 TCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGT 205223 || ||| || |||||| |||||| || |||| || |||||||| || | | | | | Sbjct 6789 GCTTCATGAAGAGGTCGGAGATCCAAAGTGCGTAGAAGAGATCACGAGCGCGGACTTCCT 6730 Query 205224 CGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282 | | || |||||||| || ||| || ||| || | ||||| |||||||| ||||| Sbjct 6729 CTTTACCGTGGTTCTTTCGCAGGTCGAGG-AAGTCGAAGATGTCTGCGTGCCAAGGCTCG 6671 Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATC 205342 | | | ||| | || || || | |||||| |||||||||||||| |||| | Sbjct 6670 AGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCCACGTATCGAGCAGTA 6611 Query 205343 GCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATG 205402 || | | || | || ||||| || || | |||||||| | ||||| || | ||| Sbjct 6610 GCATCGTAAGCACGGAGCATAGGGACGATACCGTTGGAGTAGCCGTTGGTACCAGCAATG 6551 Query 205403 GCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCG 205462 |||||| | || | | |||| |||| | || || ||||||| | ||||| | Sbjct 6550 TACGAGCCCTTGGCACGGATGTTGTGGATGTGCAGACCGATACCGCCAGCAGTCTTGGAG 6491 Query 205463 ATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGT 205521 ||||||||||| ||||| |||||| ||||||||| | || || || || || | Sbjct 6490 ATCTGGGCGCAGGTCTTG-AGAGTGTCGTAGATGCCGTCAATCGAGTCATCACGCATGGC 6432 Query 205522 CACCAGATAGCACGAAGCCAGCTTGGCAAAGTTG---GTGCCCGCGTGGAAGAGC 205573 || || |||| || | || || ||| |||| ||||| |||| ||||||| Sbjct 6431 GACGAGGAAGCAAGACGACATCTGGGC---GTTGGGTGTGCCAGCGTTGAAGAGC 6380 Score = 86.0 bits (94), Expect = 1e-11 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908 ||||||||||| || | | | |||| || | | || ||||| |||||||| || Sbjct 8023 GTGAACTGAATAGCTTGGGCAGAAGGCTTGGTGCGGAGGTAGTAAGCACCGGTCTTGAGT 7964 Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAG-TTTGCTCACGTTGGGGTCGGCCAT 203967 ||| ||| ||| ||||| | |||||| || | || | | | | | |||| ||| | Sbjct 7963 CCCCTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGAGAGAATGAT-GGGTTGGCGAG 7905 Query 203968 GTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGAT 204027 ||| ||||| || ||||| ||| |||||| | | | || || ||||||| | || Sbjct 7904 GTGGATGTTGAGCGACTGCGATTGATCGATGTACGCTCCTCGGTCGGCGGCCAAGTCAAT 7845 Query 204028 AATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | || ||| ||||| |||||||| ||||||||| Sbjct 7844 GACGGCCTTTTGCGAGATCTCCCAGACCGTCTTG 7811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795120392081120