Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3359 120 4e-22 seq3392 113 5e-20 >seq3359 Length=24196 Score = 120 bits (132), Expect = 4e-22 Identities = 105/131 (80%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||| ||| || || ||||| |||||| ||||||||||| ||||||| |||| Sbjct 3864 CCCTCATCGCGGCTGATGAGCTCATTCGAGAAGGTGAGGCCTGGCATAAGACCCCTCTTC 3923 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 || | ||| | || ||| |||||||||||| |||||||| ||||| ||||| |||||| Sbjct 3924 TTGAGCCAGAAGATGGCGGCGAATGACCCGGAAAAGAAGATGCCCTCAACACAGGCAAAC 3983 Query 117412 GCAAAAAGGCG 117422 |||| ||||| Sbjct 3984 GCAACGAGGCG 3994 >seq3392 Length=91092 Score = 113 bits (124), Expect = 5e-20 Identities = 173/243 (71%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| |||||||| || || || || || || || |||||| || || Sbjct 44487 GCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCG 44546 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| || |||||||||| ||| | || | ||| ||| || |||||||||||||| Sbjct 44547 GGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGC-GAACGAGCCGGAGAAGAAGAT 44605 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449 ||||| || || || || | |||||||||||||||| | || ||||| Sbjct 44606 GCCCTCGACGGCAGCGAAAGCGATGAGGCGCTCGGCGAAGGTG---GATCGGGTGTCCGT 44662 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509 | ||| || | ||||| | |||||||||| ||||| || | || | |||||| || Sbjct 44663 GATCCACTTGAGAGCCCACTCGGCCTTCTTCTTGATACACGGGATGGTGTCGATGGCCTC 44722 Query 117510 AAA 117512 || Sbjct 44723 GAA 44725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589954973590480