Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2769 141 8e-29 >seq2769 Length=42269 Score = 141 bits (156), Expect = 8e-29 Identities = 238/342 (70%), Gaps = 2/342 (1%) Strand=Plus/Plus Query 30043 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30102 || |||||||| |||| || | ||| |||||||| ||||| | |||||| | | Sbjct 4512 TTCGGGTTCCACGCGCTCAGCACGATCCGCCTGTCCGTCGGGTTCTCCCTGATCTTGCGC 4571 Query 30103 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTA 30161 ||| | | ||||| ||||||||| |||| || || || | || |||| ||| Sbjct 4572 ACGACCTCCGCGAGCTGGTCCACCCCCTGGCCCGCATAATCGTCCTCGCACGTCCC-GTA 4630 Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221 | || || ||||||| |||||| |||||||||||||| |||||||| ||||| || Sbjct 4631 CGGAGCGCCAAAATGCCGCCACTGAAACCCGTACACCGGCCCCAGGTCGCCCTCGCGCCG 4690 Query 30222 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281 || | | |||| ||| | | || ||| |||||| | |||||||| || || Sbjct 4691 ATGACCAAGGCCCACGCGGTCGAGGTACTCCCTGCTGCCGTTGCCTTCCCAGATATTCAC 4750 Query 30282 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341 ||||| | || |||| ||| || ||| |||| || |||||||||||||||||||| Sbjct 4751 CCCCTGCGCGCTGAGCCGCTTGCCGTCCGTGCACCCGCTCACGAACCACAGCAGCTCCTC 4810 Query 30342 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | ||| | | || || | |||||||||||| || || Sbjct 4811 CCATACGCCGCGCAGGAACACGCGCTTGGTCGTGAGCAGCGG 4852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408600159945446