Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1542 228 2e-54 seq3392 183 6e-41 seq3359 104 4e-17 >seq1542 Length=14377 Score = 228 bits (252), Expect = 2e-54 Identities = 688/1041 (66%), Gaps = 41/1041 (4%) Strand=Plus/Minus Query 221398 GGCCTGGGCGCAAGACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGT 221456 |||| | |||| ||| || || || || || |||||||||||||| |||||| ||| Sbjct 7412 GGCCAGCTCGCACGAC-GCCTCGAGCGCGGCATGGTAGATGGTCTCGAAGATCTGGATGT 7354 Query 221457 TGAGTCTCTTGGCCT-CGGGAGAAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGC 221514 |||| ||| || | |||| || ||| ||||| || || | |||| | | ||||| Sbjct 7353 TGAG-CTCGCGGGCGGCGGGCGAGTCGAATGGCATGCGAAGAGCCATGAACG-CATCGGC 7296 Query 221515 CAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGG 221574 || ||||| || |||| ||||| || | ||||| |||||| | ||||| || Sbjct 7295 GAGACCCTGAACACCGAGACCGACCGGTCGGTGTCGGAAGTTGGAGTTGCGAGCTTCAGG 7236 Query 221575 CACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCAC 221634 || || || | ||| ||| | ||| |||||| || | ||| || | Sbjct 7235 AACAGGGTAGTAATTGCGCGAGATGACGGTGTCAAGGTTCTTGGTAACGACCTTGGTGAT 7176 Query 221635 CTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAA 221694 |||| |||||||| | | | | || ||| ||| | || || || || Sbjct 7175 CTCGTGCAGCTTCTTGAAGTCGTAGAC----TCGGCGCTC-CATG-------TCGACGAA 7128 Query 221695 AGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTG 221754 || ||||| | ||| ||||| || ||||| || || || | |||| Sbjct 7127 TGCTGGCAGGGCGAGCGAGGCGAGGTTGCAAACGGCGACTTCATCGGGAGCAGAGTACTC 7068 Query 221755 TATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTT 221814 |||||||| || ||||||||| ||||||| || || ||||| | || || ||||| Sbjct 7067 GATGATCTCAGTGCAGAGGTTGGACGACTTGATTGTGCCGAGGTGCTGCTGGTTGGACTT 7008 Query 221815 GCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAG 221874 ||| ||||| ||||||||||| ||||| || || || || ||||| ||| ||| | || Sbjct 7007 GCGGTTGGCGGCGTCCTTGTACAGCATGAAAGGTCCACCGGTCTCGGTCTGGGCCTCGAG 6948 Query 221875 AATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCT 221930 || | |||||| | |||| || | | ||| ||| ||||| ||| || Sbjct 6947 GATGGCGAACCAGAGCT-TCTGAGCCTTGATGGTC---TTGCG---ACCCTTGCCGGCCT 6895 Query 221931 TTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGAC 221990 | || || || |||||| | || || | || || || ||||||| || | Sbjct 6894 TCTCGTAGCCCTCGTAGAGCTTCTCGAAGTCATCCGAGTGGCAGTCAGCCAGGCCGGGGC 6835 Query 221991 ACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGT 222050 || |||||| ||||||||| |||||| | | | ||| | || ||||||||||| Sbjct 6834 ACTCGGCGGGGCACATCAGAGTCCAGTCGCCATCGGACTCGACGCGCTTCATGAAGAGGT 6775 Query 222051 CCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTT 222110 | | |||||| || || | |||||||| | | || ||||| |||| ||| | Sbjct 6774 CGGAGATCCAAAGTGCGTAGAAGAGATCACGAGCGCGGACTTCCTCTTTACCGTGGTTCT 6715 Query 222111 TCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAG 222170 | | ||| || | || || || ||||| |||||||| ||||| || |||| ||| | || Sbjct 6714 TTCGCAGGTCGAGGAAGTCGAAGATGTCTGCGTGCCAAGGCTCGAGGTAGATGGCGAAAG 6655 Query 222171 CGCCGGGTCGCTTGTTGCCACCCTGATCCAC-CATCCTCTCCAG-AGCGTTGAAGATGCG 222228 | ||||||||||||||||||||||| ||||| ||| ||| ||| | | | || Sbjct 6654 CACCGGGTCGCTTGTTGCCACCCTGGTCCACGTATC--GAGCAGTAGCATCGTAAGCACG 6597 Query 222229 AAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGC 222288 || | || || | |||||||| |||||||| || |||||||| || ||| Sbjct 6596 GAGCATAGGGACGATACCGTTGGAGTAGCCGTTGGTACCAGCAATGTACGAGCCCTTGGC 6537 Query 222289 CCTCAGGTTACTGGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGC 222347 | | ||| ||| | || |||||||| || || || |||||| ||||||| Sbjct 6536 ACGGATGTT-GTGGATGTGCAGACCGATACCGCCAGCAGTCTTGGAGATCTGGGCGCAGG 6478 Query 222348 TCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTC---CTTGACGTTCAGCAGAAAAC 222404 ||||||||||||| |||||| || || ||||| || | || || | || || | Sbjct 6477 TCTTGAGAGTGTCGTAGATGCCGTCAATCGAGTCATCACGCATGGCG---ACGAGGAAGC 6421 Query 222405 AAGACGACATCTGAGATTTGG 222425 ||||||||||||| | |||| Sbjct 6420 AAGACGACATCTGGGCGTTGG 6400 >seq3392 Length=91092 Score = 183 bits (202), Expect = 6e-41 Identities = 239/329 (73%), Gaps = 9/329 (3%) Strand=Plus/Minus Query 25795 GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCA-- 25852 |||||||| ||| || | ||||||| |||||| |||||| | |||||||||| Sbjct 44719 GCCATCGACACCATCCCGTGTATCAAGAAGAAGGCCGAGTGGGCTCTCAAGTGGATCACG 44660 Query 25853 -ACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATC 25911 ||| || | | || || | |||||| || | || || ||||| || ||||||||| Sbjct 44659 GACACCC---GATCCACCTTCGCCGAGCGCCTCATCGCTTTCGCTGCCGTCGAGGGCATC 44603 Query 25912 TTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGG 25971 || ||| ||| ||||| ||| ||||||||||||| ||| || || ||||||||| Sbjct 44602 TTCTTCTCCGGCTCGTTCGCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGT 44543 Query 25972 CTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGC 26031 || ||| ||||||||||||||| | ||||||||||| |||| || ||||| ||| Sbjct 44542 CTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTTCACACCGACTTTGCTTGC 44483 Query 26032 CTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATC 26091 ||||||| ||| |||| | | || | ||| || ||||||||| | | |||||| Sbjct 44482 CTGCTCTTCAC---CCACCTCCGCCGCCGCCCTCATCCCGAGACCGTCGAAAAGATCATC 44426 Query 26092 AAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 ||||| || |||||||| ||||||| Sbjct 44425 CGCGAGGCCGTCAAGATCGAGCAGGAGTT 44397 >seq3359 Length=24196 Score = 104 bits (114), Expect = 4e-17 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938 || || || || ||||| ||| ||||||||||| || ||| || || || |||||| Sbjct 3994 CGCCTCGTTGCGTTTGCCTGTGTTGAGGGCATCTTCTTTTCCGGGTCATTCGCCGCCATC 3935 Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998 |||||||||||| ||| ||| ||||| || || ||| || || |||||||||||| Sbjct 3934 TTCTGGCTCAAGAAGAGGGGTCTTATGCCAGGCCTCACCTTCTCGAATGAGCTCATCAGC 3875 Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 | || ||||| |||| ||| || || ||| |||||||| Sbjct 3874 CGCGATGAGGGCACACACACAGACTTCGCATGCTTGCTCTAC 3833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928804139818880