Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1746 86.0 8e-12 >seq1746 Length=12186 Score = 86.0 bits (94), Expect = 8e-12 Identities = 173/257 (67%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 47800 ACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTG 47859 ||||| || || || | || || || ||||| | |||||| |||||| || || | Sbjct 10157 ACAAAGTCCTCCGGGGCGTCCTGCTGGAGCATGAGCCACATGCCCTCGATGTAGTCGCGA 10216 Query 47860 GCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCT 47919 ||||||||||||||||| ||||| || || || || || | |||||| | ||| Sbjct 10217 GCATGTCCCCAGTCACGCTTGGCATCGAGGTTACCGAGGTAGAGGCAGTCTGCGTGACCA 10276 Query 47920 TCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTT 47979 | ||| | | |||| | ||||| || || || |||||| ||||| | Sbjct 10277 GTGGCGATCTCGGCGACGGCTCGCGAGATCTTTCGGGTGACGAAAGTTCGTCCACGACGA 10336 Query 47980 GGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAG 48039 ||||| || || || || | |||||| | || || ||||| ||||| | || || ||| Sbjct 10337 GGAGACTCGTGGTTGAACAAAATACCGTTGCAAGCGTACATGCCGTAGGCCTCGCGGTAG 10396 Query 48040 TTCTTTACTATCCAGTA 48056 || || |||||||| Sbjct 10397 TTGACGACGATCCAGTA 10413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665465267982640