Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3359 120 4e-22 seq3392 113 5e-20 >seq3359 Length=24196 Score = 120 bits (132), Expect = 4e-22 Identities = 105/131 (80%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATT 65139 ||||| |||||||||| ||||| ||||| |||||||| |||||||||||| ||| || Sbjct 3994 CGCCTCGTTGCGTTTGCCTGTGTTGAGGGCATCTTCTTTTCCGGGTCATTCGCCGCCATC 3935 Query 65140 TATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCC 65199 | ||| | |||||| ||||||| ||||||||||| |||||| ||||| || || | Sbjct 3934 TTCTGGCTCAAGAAGAGGGGTCTTATGCCAGGCCTCACCTTCTCGAATGAGCTCATCAGC 3875 Query 65200 CGAGATGAGGG 65210 || |||||||| Sbjct 3874 CGCGATGAGGG 3864 >seq3392 Length=91092 Score = 113 bits (124), Expect = 5e-20 Identities = 173/243 (71%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || || |||||| | || | || ||||| |||||||||| | ||||| | || ||| Sbjct 44725 TTCGAGGCCATCGACACCATCCCGTGTATCAAGAAGAAGGCCGAGTGGGCTCTCAAGTGG 44666 Query 65050 TTT---GACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAG 65106 | ||||| || | |||||||||||||||| | || || || || ||| Sbjct 44665 ATCACGGACACCCGATC---CACCTTCGCCGAGCGCCTCATCGCTTTCGCTGCCGTCGAG 44609 Query 65107 GGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCAT 65165 || |||||||||||||| || ||| ||| | || | ||| |||||||||| || ||||| Sbjct 44608 GGCATCTTCTTCTCCGGCTCGTTC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTCAT 44550 Query 65166 GCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTT 65225 ||| || || |||||| || || || || || || || |||||||| ||| || || Sbjct 44549 GCCCGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTTCACACCGACTT 44490 Query 65226 TGC 65228 ||| Sbjct 44489 TGC 44487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596543485165760