Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3392 89.7 2e-12 >seq3392 Length=91092 Score = 89.7 bits (98), Expect = 2e-12 Identities = 213/317 (67%), Gaps = 4/317 (1%) Strand=Plus/Minus Query 133342 GGAAAATATCCATTCTATCACATATTCTACTC-TAATTGATACTTACATCAAAGATACCG 133400 ||| || ||||| ||| || || || |||| | || || || |||||||| || | || Sbjct 44801 GGAGAACATCCACTCTGAGACCTACTC-ACTCCTCATCGACACCTACATCAAGGACAACG 44743 Query 133401 TCCAGAAGCA-CAAACTATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCT 133459 || | ||| | | || ||| | ||||| | | || ||||| || ||||| | Sbjct 44742 ACC-GCCGCAACTACCTCTTCGAGGCCATCGACACCATCCCGTGTATCAAGAAGAAGGCC 44684 Query 133460 GACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCT 133519 || |||||| | || |||||| ||||| || | | || || || ||| | ||| Sbjct 44683 GAGTGGGCTCTCAAGTGGATCACGGACACCCGATCCACCTTCGCCGAGCGCCTCATCGCT 44624 Query 133520 TTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAA 133579 || |||| || |||||||| || ||| || ||||| || || || ||||| || Sbjct 44623 TTCGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCGTCCATCTTCTGGCTGAAG 44564 Query 133580 AAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCA 133639 ||||| || | | || || || || || ||||| || || || | ||||||| Sbjct 44563 AAGCGCGGCCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGT 44504 Query 133640 CTTCACACCGAATTTGC 133656 ||||||||||| ||||| Sbjct 44503 CTTCACACCGACTTTGC 44487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471751560464174