Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1820 149 6e-31 >seq1820 Length=19797 Score = 149 bits (164), Expect = 6e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || || |||||||| ||| | || Sbjct 594 ATGCAGATTTTCGTCAAAACTCTCACCGGGAAGACAATCACTCTCGAAGTTGAATCGTCC 653 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | |||||| |||||||| |||||||| || || || || ||||| Sbjct 654 GACACAATCGACAACGTAAAAGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGATCAG 713 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||||||||| ||||| |||||| ||| |||| || || ||| Sbjct 714 CAACGTCTCATCTTTGCCGGGAAGCAGCTTGAGGATGGACGAACTCTGTCGGACTACAAC 773 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||| || || ||||| || ||| | || |||| Sbjct 774 ATTCAGAAAGAGTCGACTCTTCACCTCGTCCTGCG 808 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | |||||||| ||||| || || || || ||||| || ||| | | Sbjct 365 GATGCAGATCTTCGTGAAAACGCTTACCGGCAAGACCATCACTCTCGAGGTCGAATCATC 424 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||| || ||||| || || || || || || Sbjct 425 TGACACTATCGACAACGTGAAGGCAAAGATCCAGGATAAAGAGGGTATTCCGCCTGACCA 484 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| | ||||| || || || ||| |||| || | | | | || || || || Sbjct 485 GCAACGTCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGCACCCTCTCCGACTACAA 544 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || || || ||||| || ||| | || | ||| | || || || Sbjct 545 CATCCAGAAAGAGTCGACCCTTCACCTTGTACTTCGACTTCGGGGCGG 592 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || |||||||| || ||| | Sbjct 138 ATGCAGATCTTCGTGAAGACCCTTACTGGCAAGACGATCACCCTCGAAGTCGAGTCCAGC 197 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 198 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 257 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || || || ||||| | | | || ||||| ||| Sbjct 258 CAACGTCTCATCTTCGCTGGCAAGCAACTCGAGGACGGCCGTACACTTTCCGATTACAAC 317 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| || || || || ||| | ||| | || | ||||| || Sbjct 318 ATCCAAAAAGAGTCCACCCTCCACCTTGTGCTCCGTCTCCGCGGTGG 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449877905732560