Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1820 104 2e-17 >seq1820 Length=19797 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||| | || || ||| ||||||||| |||||||||||||| Sbjct 364 CCACCGCGGAGACGGAGCACAAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAATCGGAA 305 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| || |||| || | ||| || || || || || | ||| ||||| || |||| Sbjct 304 AGTGTACGGCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGCGGG 245 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || | | |||| ||| | ||||||||| || || || Sbjct 244 ATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACATTGTCGATGGTGTCGCTGGACTCGAC 186 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||||| || || || | || || || |||||||||||| Sbjct 185 TTCGAGGGTGATCGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCATA 137 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 |||||| || |||||||| |||||||| ||||| |||| ||||| || || || || || Sbjct 557 CTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAACTGCTTGCCAGCGAA 498 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 || | ||| ||||| || |||| | ||| ||||| || || || |||| | | Sbjct 497 GATGAGACGTTGCTGGTCAGGCGGAATACCCTCTTTATCCTGGATCTTTGCCTTCA-CGT 439 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||| |||||| || || | ||||| || || || || | |||||| | Sbjct 438 TGTCGATAGTGTCAGATGATTCGACCTCGAGAGTGATGGTCTTGCCGGTAAGCGTTTTCA 379 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 378 CGAAGATCTGCAT 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328689970707840