Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1820 132 1e-25 >seq1820 Length=19797 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 |||||||| || || || || |||||| | || || ||| |||||||| |||| Sbjct 381 AAAACGCTTACCGGCAAGACCATCACTCTCGAGGTCGAATCATCTGACACTATCGACAAC 440 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| || || ||||| || ||| ||| ||| ||| | || |||||| Sbjct 441 GTGAAGGCAAAGATCCAGGATAAAGAGGGTATTCCGCCTGACCAGCAACGTCTCATCTTC 500 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||||||||||| || | || | |||| |||||| ||||||||||||| Sbjct 501 GCTGGCAAGCAGTTGGAAGACGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAGTCG 560 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||||||||| | ||||||| Sbjct 561 ACCCTTCACCTTGTACTTCGACTTCG 586 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| || || || |||||| | ||||| ||| || ||| Sbjct 597 CAGATTTTCGTCAAAACTCTCACCGGGAAGACAATCACTCTCGAAGTTGAATCGTCCGAC 656 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| ||||| ||||| || || ||||| || || || || ||| Sbjct 657 ACAATCGACAACGTAAAAGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGATCAGCAA 716 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| |||||| | || |||||| | ||| || | || |||||| | Sbjct 717 CGTCTCATCTTTGCCGGGAAGCAGCTTGAGGATGGACGAACTCTGTCGGACTACAACATT 776 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| ||||||||||| || Sbjct 777 CAGAAAGAGTCGACTCTTCACCTCGT 802 Score = 87.8 bits (96), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 || ||||||||||| ||||||||||| | || ||||| | || ||| | |||||| || Sbjct 802 ACGAGGTGAAGAGTCGACTCTTTCTGAATGTTGTAGTCCGACAGAGTTCGTCCATCCTCA 743 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| ||||| ||||| || ||||| ||| Sbjct 742 AGCTGCTTCCCGGCAAAGATGAGACGTTGCTGA 710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181767772439342