Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2769 111 2e-19 >seq2769 Length=42269 Score = 111 bits (122), Expect = 2e-19 Identities = 193/274 (70%), Gaps = 10/274 (4%) Strand=Plus/Plus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCA-GTCCACGTACCTGGCCCCAA 147289 ||||||||||| ||||||||| | || | |||| |||| |||| ||||| || |||| Sbjct 4584 AGCTGGTCCACCCCCTGGCCCGCATA-ATCGTCCTCGCACGTCC-CGTACGGAGCGCCAA 4641 Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGC---CGGGCTTTCTGTGCGAGA 147346 | |||| |||||| || |||||||| ||||||||||||| || || | || | Sbjct 4642 AATGCCGCCACTGAAACCCGTACACCGGCCCCAGGTCGCCCTCGCGC---CGATGACCAA 4698 Query 147347 AGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGG 147406 |||| | || | ||| |||| | |||| | | |||||||| ||| |||| | Sbjct 4699 GGCCCACGCGGTCGAGGTACTCCCTGCTGCCGTTGCCTTCCCAGATATTCACCCCCTGCG 4758 Query 147407 CGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCC 147466 || |||| ||| ||||||| | || | | |||||| |||||||||||| | || | Sbjct 4759 CGCTGAGCCGCTTGCCGTCCGTGCACCCGCTCACGAACCACAGCAGCTCCTCCCATACGC 4818 Query 147467 CCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 | | | || || | |||||| || ||||| || Sbjct 4819 CGCGCAGGAACACGCGCTTGGTCGTGAGCAGCGG 4852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583462457812800