Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1820 98.7 9e-16 seq611 87.8 2e-12 >seq1820 Length=19797 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| ||||| ||||||||||||| | || || |||| || || ||||| || || || Sbjct 329 CTCTTTTTGGATGTTGTAATCGGAAAGTGTACGGCCGTCCTCGAGTTGCTTGCCAGCGAA 270 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | || | || |||||||||| |||||| ||| | | | Sbjct 269 GATGAGACGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 210 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| || || || || | |||||||| || || || | || ||||| Sbjct 209 GTCGATGGTGTCGCTGGACTCGACTTCGAGGGTGATCGTCTTGCCAGTAAGGGTCTTCAC 150 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 149 GAAGATCTGCAT 138 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||| || | || ||||| | || || |||||||| || ||||| Sbjct 785 CTCTTTCTGAATGTTGTAGTCCGACAGAGTTCGTCCATCCTCAAGCTGCTTCCCGGCAAA 726 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||| || | || | || ||| |||||| |||| || |||| || Sbjct 725 GATGAGACGTTGCTGATCAGGGGGGATGCCCTCTTTGTCCTGGATC-TTCGCTTTTACGT 667 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| |||||| || || | ||||| || || || || | |||||| | Sbjct 666 TGTCGATTGTGTCGGACGATTCAACTTCGAGAGTGATTGTCTTCCCGGTGAGAGTTTTGA 607 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 606 CGAAAATCTGCAT 594 >seq611 Length=5502 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || |||||||| || || || ||||| ||||||||||| | ||||| || ||||||| Sbjct 209 TCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTG 268 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| |||||| || | | | | | ||||||||||||||| || || | || || Sbjct 269 TCCTGGATCTTGGCTTTGACATTGTCGATCGTGTCGCTCGATTCGACTTCGAGGGTAATG 328 Query 35702 GTTTTACCCGT 35712 || || ||||| Sbjct 329 GTCTTGCCCGT 339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450773866510160