Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3359 98.7 1e-15 >seq3359 Length=24196 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| |||||||| ||| ||||||||| | || || | || || || || ||| Sbjct 3840 AAGCATGCGAAGTCTGTGTGTGTGCCCTCATCGCGGCTGATGAGCTCATTCGAGAAGGTG 3899 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 || || ||||| ||||| | ||| |||||||| || ||||| || || || || |||||| Sbjct 3900 AGGCCTGGCATAAGACCCCTCTTCTTGAGCCAGAAGATGGCGGCGAATGACCCGGAAAAG 3959 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 |||||||| || || ||||| ||||| || Sbjct 3960 AAGATGCCCTCAACACAGGCAAACGCAACGAG 3991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686878730567280