Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1820 116 3e-21 >seq1820 Length=19797 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || ||||||||| | | |||| ||||||| | ||| || || Sbjct 562 GTCGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAACTGCTTGCCA 503 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | |||||||| || || || ||||| | |||||||||||| |||||| ||| Sbjct 502 GCGAAGATGAGACGTTGCTGGTCAGGCGGAATACCCTCTTTATCCTGGATCTTTGCCTTC 443 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | | ||| || || ||||| || | ||||| || || ||| Sbjct 442 ACGTTGTCGATAGTGTCAGATGATTCGACCTCGAGAGTGATGGTCTTGCCGGTAAGCGTT 383 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 382 TTCACGAAGATCTGCAT 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424916263534224