Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3359 114 2e-20 seq3392 109 7e-19 >seq3359 Length=24196 Score = 114 bits (126), Expect = 2e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||| ||| || || ||||| |||||| || |||||||| ||||||| |||| Sbjct 3864 CCCTCATCGCGGCTGATGAGCTCATTCGAGAAGGTGAGGCCTGGCATAAGACCCCTCTTC 3923 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 || | ||| | || ||| |||||||||||| |||||||| ||||| ||||| |||||| Sbjct 3924 TTGAGCCAGAAGATGGCGGCGAATGACCCGGAAAAGAAGATGCCCTCAACACAGGCAAAC 3983 Query 122797 GCAAAAAGGCG 122807 |||| ||||| Sbjct 3984 GCAACGAGGCG 3994 >seq3392 Length=91092 Score = 109 bits (120), Expect = 7e-19 Identities = 173/242 (71%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| || || || || || || || |||||| ||||| Sbjct 44487 GCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCG 44546 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 |||||||| || |||||||||| ||| | || | ||| ||| || |||||||||||||| Sbjct 44547 GGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGC-GAACGAGCCGGAGAAGAAGAT 44605 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGA--GACTTTGCATCA 122835 ||||| || || || || | ||||| |||||||||| | || | | | | | Sbjct 44606 GCCCTCGACGGCAGCGAAAGCGATGAGGCGCTCGGCGAAGGTG-GATCGGGTGTCCGT-G 44663 Query 122836 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 122895 | ||| || | ||||| | |||||||||| ||||| || | || | |||||| || Sbjct 44664 ATCCACTTGAGAGCCCACTCGGCCTTCTTCTTGATACACGGGATGGTGTCGATGGCCTCG 44723 Query 122896 AA 122897 || Sbjct 44724 AA 44725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628004507899200