Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1542 197 2e-45 seq3392 154 2e-32 seq3359 111 2e-19 >seq1542 Length=14377 Score = 197 bits (218), Expect = 2e-45 Identities = 1057/1671 (63%), Gaps = 47/1671 (3%) Strand=Plus/Minus Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857 |||| | |||||||||| | | || | ||| | ||||||||||| || ||| Sbjct 8029 TCAATGGTGAACTGAATAGCTTGGGCAGAAGGCTTGGTGCGGAGGTAGTAAGCACCGGTC 7970 Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917 ||||| ||| ||||||| | || | ||||| |||| | || |||| | ||| | Sbjct 7969 TTGAGTCCCCTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGAGAGAATGATGGGTTG 7910 Query 117918 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 117977 | | | || ||| | || |||||||||||| | ||| || || || |||| Sbjct 7909 GCGAGGTGGATGTTGAGCGACTGCGATTGATCGATGTACGCTCCTCGGTCGGCGGCCAAG 7850 Query 117978 TCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCT 118037 ||||| || |||| | ||| ||||| || ||| |||||| ||| | || | Sbjct 7849 TCAATGACGGCCTTTTGCGAGATCTCCCAGACCGTCTTGTAGATAGCCTTGAGCTCGGCC 7790 Query 118038 GGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCC 118097 ||||| || ||| || ||||| ||||| || || || ||||| | |||||| | Sbjct 7789 GGGATGCCCGGGATGTTCTGGATCGATCCGCCAGCAGCGATGATGAGGTTCTTCATGTTG 7730 Query 118098 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACA--- 118154 | ||| ||||| | || |||| || || | | | | ||| || Sbjct 7729 TCATCCCACAGACCGAGATTGATGAGGTCTCGCAGCAA---CCAAGGGCAAACGACCTGG 7673 Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 || || || | ||| || | || | ||| ||||||||||| |||||||| Sbjct 7672 AAATCGCCGGACAGGACACGACGTGCGTACAGCATGGATGTGTATGGCTCGAAGCACTCG 7613 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 || |||||||||||| | || ||||| || |||||||| || | ||||| ||| Sbjct 7612 TTCCAACCCAAGATTTGCGAGGTCGAGGCAGTCGGCATGGGAGCGACAAGAAGCGAGTTG 7553 Query 118275 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTC--GTAGTTGAGCTTTG 118332 || | || | || ||| || | | | | ||||| || ||| | | Sbjct 7552 CGAACGCCGTGCTCG-----GCGATCTTGGCACGAAGCTCAGTCCAGTCCCAGAGATCGG 7498 Query 118333 TCTCCCCCTG---CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 118389 || | | ||| | |||||||| || | || || || || || ||||| Sbjct 7497 TCGGGACGCGACCCCAAAGGTCAAACTGCAGCTTGCCCTGAGAGATGGGAGAGCCCTCGT 7438 Query 118390 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 118449 ||| ||||||| |||| ||| |||| ||| | ||||||||| || || || | Sbjct 7437 ATGACTCATATCTCCCCTGCTCCTGGGCCAGCTCGCACGACGCCTCGAGCGCGGCATGGT 7378 Query 118450 ACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTC 118509 | || || || || || | || | | ||| || || || || | | | Sbjct 7377 AGATGGTCTCGAAGATCTGGATGTTGAGCTCGCGGGCGGCGGGCGAGTCGAATGGCATGC 7318 Query 118510 GGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 118569 | || || |||| |||||||| || |||||||| || | || || |||| | Sbjct 7317 GAAGAGCCATGAACGCATCGGCGAGACCCTGAACACCGAGACCGACCGGTCGGTGTCGGA 7258 Query 118570 TATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 118629 || || || ||||| || || || |||| | ||| || | | || | Sbjct 7257 AGTTGGAGTTGCGAGCTTCAGGAACAGGGTAGTAATTGCGCGAGATGACGGTGTCAAGGT 7198 Query 118630 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCT 118688 | ||||| || ||||| ||||| || || ||||| | | | || | ||| | | ||| Sbjct 7197 TCTTGGTAACGACCTTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGACTCGGCG-CTCC 7139 Query 118689 TCATTGAC--ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 118746 | ||| || || || ||||||| || || || || || || | | ||||| Sbjct 7138 ATGTCGACGAATGCT--GGCAGGGCGAGCGAGGCGAGGTTGCAAACGGCGACTTCATCGG 7081 Query 118747 TATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCT 118806 | ||| |||||| || || || ||||| | ||| || ||| || ||||| | || || Sbjct 7080 GAGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGACGACTTGATTGTGCCGAGGTGCT 7021 Query 118807 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 118866 || || ||||| ||| || |||||||| |||||| | || || ||||| | Sbjct 7020 GCTGGTTGGACTTGCGGTTGGCGGCGTCCTTGTACAGCATGAAAGGTCCACCGGTCTCGG 6961 Query 118867 TTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG----C 118921 | |||| || ||| || || ||||| | || | || | ||| ||| | Sbjct 6960 TCTGGGCCTCGAGGATGGCGAACCAGAGCTTCTGAGCCTTGA----TGGTCTTGCGACCC 6905 Query 118922 TCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCC-TCTG 118980 | ||| |||| ||||| |||||| || || || || | ||| || | Sbjct 6904 TTGCCGGCCTTC-TCGTAGCCCTCGTAGAGCTTCTCGAAGTCATC-CGAGTGGCAGTCAG 6847 Query 118981 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCT 119040 || || || || | ||||| | |||| ||| | ||| | ||| || |||| Sbjct 6846 CCAGGCCGGGGCACTCGGCGGGGCACATCAGAGTCCAGTCGCCATCGGACTCGACGCGCT 6787 Query 119041 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 119100 ||||||||||||| | |||||| || || |||||||||| ||| ||| |||| || | Sbjct 6786 TCATGAAGAGGTCGGAGATCCAAAGTGCGTAGAAGAGATCACGAGCGCGGACTTCCTCTT 6727 Query 119101 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 119160 || || || |||| || | ||||| | ||| || |||||||| || || |||| Sbjct 6726 TACCGTGGTTCTTTCGCAGGTCGAGGAAGTCGAAGATGTCTGCGTGCCAAGGCTCGAGGT 6667 Query 119161 ACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGG 119214 | | |||| | || ||| | | ||| |||||| || || | ||||| | Sbjct 6666 AGATGGCGAAAGCACCGGGTCGCTT--GTTG-CCACCCTGGTCCACGTATCGAGCAGTAG 6610 Query 119215 CGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT-- 119272 | | | |||| ||||| || | |||||| | ||| | ||| || || || ||| Sbjct 6609 CATCGTAAGCACGGAGCATAGGGACGATACCGTTGGAGTAGCCGTTGGTACCAGCAATGT 6550 Query 119273 ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGA 119332 ||||| | | |||| | || | ||||||||||| ||| ||||| || || ||| || Sbjct 6549 ACGAGCCCT--TGGCACGGATGTTGTGGATGTGCAGACCGATACCGCCAGCAGTCTTGGA 6492 Query 119333 GATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGC 119392 ||| || ||||| | ||||| || ||||||| || || ||||||||| | | || Sbjct 6491 GATCTGGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTCAATCGAGTCATCACGCATGGC 6432 Query 119393 GATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAG 119443 || ||||||||| |||||| || | ||||||| |||||||||||||| Sbjct 6431 GACGAGGAAGCAAGACGACATCTGGGCGTTGGGTGTGCCAGCGTTGAAGAG 6381 >seq3392 Length=91092 Score = 154 bits (170), Expect = 2e-32 Identities = 182/245 (74%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| |||||||||||||| |||||||| || || |||||| ||||| Sbjct 44487 GCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCG 44546 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||||||| || |||||||||| |||||| || | || ||||| ||||||||||| Sbjct 44547 GGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAACGAGCCGGAGAAGAAGATG 44606 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA---GGAGCGGGACTTTGTATCA 130192 ||||| || ||||| || | ||| ||||| || || ||| |||| | || Sbjct 44607 CCCTCGACGGCAGCGAAAGCGATGAGGCGCTCGGCGAAGGTGGATCGGGTGTCCGT---G 44663 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | |||||| | ||||||| ||||| |||| ||||||||||| ||| | ||| || || Sbjct 44664 ATCCACTTGAGAGCCCACTCGGCCTTCTTCTTGATACACGGGATGGTGTCGATGGCCTCG 44723 Query 130253 AAGAG 130257 ||||| Sbjct 44724 AAGAG 44728 >seq3359 Length=24196 Score = 111 bits (122), Expect = 2e-19 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||| || ||| |||||| |||||||||||| || |||||||| ||||||| |||| Sbjct 3864 CCCTCATCGCGGCTGATGAGCTCATTCGAGAAGGTGAGGCCTGGCATAAGACCCCTCTTC 3923 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || || ||||| || || |||||||| ||||| ||||| || ||| Sbjct 3924 TTGAGCCAGAAGATGGCGGCGAATGACCCGGAAAAGAAGATGCCCTCAACACAGGCAAAC 3983 Query 130154 GCAAAGAGACG 130164 |||| ||| || Sbjct 3984 GCAACGAGGCG 3994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618408127999120