Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3392 140 4e-28 seq1542 132 6e-26 seq3359 102 1e-16 >seq3392 Length=91092 Score = 140 bits (154), Expect = 4e-28 Identities = 181/246 (74%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| || |||||| | || | |||||||| | ||||| || || |||||| | ||| Sbjct 44728 CTCTTCGAGGCCATCGACACCATCCCGTGTATCAAGAAGAAGGCCGAGTGGGCTCTCAAG 44669 Query 94774 TGGTTTGATACAAAGTCGCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | || | | || ||| || || ||||| ||| |||| || || || Sbjct 44668 TGGATC---ACGGACACCCGATCCACCTTCGCCGAGCGCCTCATCGCTTTCGCTGCCGTC 44612 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCT 94889 ||||| ||||||||||| || || ||| ||| | || | ||||| |||||||| || || Sbjct 44611 GAGGGCATCTTCTTCTCCGGCTCGTTC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGCCT 44553 Query 94890 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGA 94949 |||||| ||||| ||||||||||||||| ||||| ||||||||||| || ||| || Sbjct 44552 CATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTTCACACCGA 44493 Query 94950 GTTTGC 94955 ||||| Sbjct 44492 CTTTGC 44487 >seq1542 Length=14377 Score = 132 bits (146), Expect = 6e-26 Identities = 813/1280 (64%), Gaps = 57/1280 (4%) Strand=Plus/Plus Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395 |||||||| ||||| ||||| | |||| ||||| ||||||||| |||||| Sbjct 6381 CTCTTCAACGCTGGCACACCCAACGCCCAGATGTCGTCTTGCTTCCTCGTCGCCATGCGT 6440 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 || ||||| || |||| ||||| | ||||| | | || || || ||||| ||| Sbjct 6441 GATGACTCGATTGACGGCATCTACGACACTCTCAAGACCTGCGCCCAGATCTCCAAGACT 6500 Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGG 104513 ||||| ||||| || |||||||||| | | | ||||| |||||| || | Sbjct 6501 GCTGGCGGTATCGGTCTGCACATCCACAACATCCGTGCCAAGGG--CTCGTACATTGCTG 6558 Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573 | || || || | || | ||||| | || ||||| || | | | || || || | Sbjct 6559 GTACCAACGGCTACTCCAACGGTATCGTCCCTATGCTCCGTGCTTACGATGCTACTGCTC 6618 Query 104574 GCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCAT 104630 | || || | || | ||| ||| || || |||| |||| || ||||| | Sbjct 6619 GATACGTGGACCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCTT 6678 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--C 104688 ||||||| || ||| | || ||||| || |||| ||||| ||| | ||||| | | Sbjct 6679 GGCACGCAGACATCTTCGACTTCCTCGACCTGCGAAAGAACCACGGTAAAGAGGAAGTCC 6738 Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748 ||| | || |||||||||| ||| || ||||| | || |||||||||||| | || || Sbjct 6739 GCGCT--CGTGATCTCTTCTACGCACTTTGGATCTCCGACCTCTTCATGAAGCGCGTCGA 6796 Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCG 104807 | |||| | ||| |||| | || || | | || || || || | || |||| Sbjct 6797 GTCCGATGGCGACTGGACTCTGATGTGCCCCGCCGAGTGCCCCGGCCTGGCTGACTGCCA 6856 Query 104808 TGGGTGAGGAGTT--TGAAGCCCTTTACACAAAG--TACGAGGAAGAAGGTCGG---GCG 104860 | || || || ||||| || || | | |||| |||||| ||| | | Sbjct 6857 CTCG-GATGACTTCGAGAAGCTCT----ACGAGGGCTACG----AGAAGGCCGGCAAGGG 6907 Query 104861 ACTGC--GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAG 104917 | || ||| | | || | || | | ||| || || ||| || | || |||||| Sbjct 6908 TC-GCAAGACCAT-CAAGGCTCAGAAGCTCTGGTTCGCCATCCTCGAGGCCCAGACCGAG 6965 Query 104918 ACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAAT 104977 || ||| ||| | |||||| ||||| |||||| |||| ||| || || || | Sbjct 6966 ACCGGTGGACCTTTCATGCTGTACAAGGACGCCGCCAACCGCAAGTCCAACCAGCAGCAC 7025 Query 104978 TTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGAT 105037 | || |||||| ||||| ||||| || || ||| | || | | | ||| Sbjct 7026 CTCGGCACAATCAAGTCGTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCTCCCGAT 7085 Query 105038 GAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CA--AGT--ATGTGGATC-C 105090 || || || || |||||||| || |||| || || || || | |||| | | Sbjct 7086 GAAGTCGCCGTTTGCAACCTCGCCTCGCTCGCCCTGCCAGCATTCGTCGACATGGAGCGC 7145 Query 105091 AGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAA 105150 ||| | | ||| || | | || || ||||| | || || || ||||| || Sbjct 7146 CGAGTCTACGAC--TTCA-----AGAAGCTGCACGAGATCACCAAGGTCGTTACCAAGAA 7198 Query 105151 CCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATAT 105210 ||| ||| || || | |||| ||||| ||| ||||| || || || | Sbjct 7199 CCTTGACACCGTCATCTCGCGCAATTACTACCCTGTTCCTGAAGCTCGCAACTCCAACTT 7258 Query 105211 GAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCG 105270 ||||||| || | ||||||||||||||||||||||| |||| ||||| | ||| Sbjct 7259 CCGACACCGACCGGTCGGTCTCGGTGTTCAGGGTCTCGCCGATGCGTTCATGGCTCTTCG 7318 Query 105271 CCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTA 105330 | |||| || || || || || |||| | || || |||||||| || Sbjct 7319 CATGCCATTCGACTCGCCCGCCGCCCGCGAGCTCAACATCCAGATCTTCGAGACCATCTA 7378 Query 105331 TCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTT 105390 || ||||| || |||||| | ||| |||| ||| | || |||||| | | Sbjct 7379 CCATGCCGCGCTCGAGGCGTCGTGCGAGCTGGCCCAGGAGCAGGGGAGATATGAGTCATA 7438 Query 105391 TGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTG---AGAC 105447 ||||| ||||| || || || ||| || ||||| | |||| | | ||| Sbjct 7439 CGAGGGCTCTCCCATCTCTCAGGGCAAGCTGCAGTTTGACCTTTGGGGTCGCGTCCCGAC 7498 Query 105448 CAAGCTTCACTACGACTGG--GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGT 105505 | | || || |||||| |||| || | | | ||| ||| | || |||| Sbjct 7499 CGA---TCTCTGGGACTGGACTGAGCT-TCGTGCCAAG-ATCGCCGAGCACGGCGTTCGC 7553 Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 ||| || || | ||||| ||||| || ||||| ||| | |||||||||||| || Sbjct 7554 AACTCGCTTCTTGTCGCTCCCATGCCGACTGCCTCGACCTCGCAAATCTTGGGTTGGAAC 7613 Query 105566 GAATGCTTTGAACCCTACAC 105585 || ||||| || || ||||| Sbjct 7614 GAGTGCTTCGAGCCATACAC 7633 >seq3359 Length=24196 Score = 102 bits (112), Expect = 1e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 94866 || ||| | || ||||| ||||||||||| |||||||| || || || ||| ||| || Sbjct 3994 CGCCTCGTTGCGTTTGCCTGTGTTGAGGGCATCTTCTTTTCCGGGTCATTCGCCGCCATC 3935 Query 94867 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 94926 | |||||||||||| | ||||| |||||||| ||| |||||| || ||||| ||| Sbjct 3934 TTCTGGCTCAAGAAGAGGGGTCTTATGCCAGGCCTCACCTTCTCGAATGAGCTCATCAGC 3875 Query 94927 CGTGACGAGGG 94937 || || ||||| Sbjct 3874 CGCGATGAGGG 3864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583235267758480